Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq11 114 1e-20 seq13 102 8e-17 >seq11 Length=2227116 Score = 114 bits (126), Expect = 1e-20 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTCCTC 131084 || ||||||| || |||||||| |||||||| || || ||| ||| | || | || || Sbjct 206673 ACCAAATGTAAAGTGGACTCCTTCTGAATGTTATAGTCAGCTAATGTTCTGCCA-TCTTC 206615 Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 ||| || || ||||| | ||||| | ||| || || || || |||||||| || || | Sbjct 206614 TAGTTGTTTTCCTGCAAATATTAATCTCTGTTGATCGGGTGGAATTCCTTCCTTATCT-T 206556 Query 131145 GATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTT 131203 || ||| ||| | | | | ||| | ||||| | ||||||| || | ||| | ||||| Sbjct 206555 GAATTTTTGCCTTAACATTCTCAATCGTATCAGATGACTCGACATCAAGGGTGATGGTTT 206496 Query 131204 TACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | ||||||| ||||||||||| || ||||| Sbjct 206495 TTCCGGTTAATGTTTTTACGAATATTTGCAT 206465 >seq13 Length=2538962 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| | ||||| || |||||||||| || || |||||||| || || ||||| | | Sbjct 759178 CCACCTCTTAAACGGAGAACTAAATGTAAAGTAGATTCCTTTTGGATATTATAATCTGAT 759119 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 ||| | | | || |||| || || ||||| | ||||| | |||||||| || || Sbjct 759118 AATGTTCTTCCA-TCTTCTAATTGTTTTCCTGCAAATATTAATCTTTGCTGGTCAGGTGG 759060 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || ||||| ||||| | || | || || | ||||| | Sbjct 759059 AATTCCTTCTTTATCTTGTATTTTAGCCTTGACGTTTTCAATTGTGTCTGATGACTCAAC 759000 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| | || | |||||| || |||| ||| ||||| ||||| ||||| Sbjct 758999 GTCTAGTGTGATGGTTTTTCCTGTTAAAGTCTTTACAAAAATTTGCAT 758952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008416181120