Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq11 131 1e-25 seq13 120 3e-22 >seq11 Length=2227116 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||| || || ||||| |||||||| ||||| |||| ||||| || || | Sbjct 206462 AAAATGCAAATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTTGATGTCGAGTCA 206521 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || |||||||||||| ||||| || |||||||||||| Sbjct 206522 TCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAGGAAGGAATTCCACCCGAT 206581 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| | | |||||||| || ||||| |||| ||| | | || | | || || Sbjct 206582 CAACAGAGATTAATATTTGCAGGAAAACAACTAGAAGATGGCAGAACATTAGCTGACTAT 206641 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || || ||||| ||||||| || Sbjct 206642 AACATTCAGAAGGAGTCCACTTTACATTTGGT 206673 >seq13 Length=2538962 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || |||||||| || ||||| |||| || || || || | | Sbjct 758952 ATGCAAATTTTTGTAAAGACTTTAACAGGAAAAACCATCACACTAGACGTTGAGTCATCA 759011 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||||| ||||| || || || |||||||| || || Sbjct 759012 GACACAATTGAAAACGTCAAGGCTAAAATACAAGATAAAGAAGGAATTCCACCTGACCAG 759071 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | |||||||| || ||||| ||||| ||| | || | || ||||| || Sbjct 759072 CAAAGATTAATATTTGCAGGAAAACAATTAGAAGATGGAAGAACATTATCAGATTATAAT 759131 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || ||||| ||||| || ||||||||||| | || || | || |||||| Sbjct 759132 ATCCAAAAGGAATCTACTTTACATTTAGTTCTCCGTTTAAGAGGTGGTTTT 759182 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| ||||| || || || |||||||| || || ||| | | |||||||| || ||| Sbjct 758808 AAAATACAAGATAAAGAAGGAATTCCACCTGACCAGCAAAGATTAATATTTGCAGGAAAA 758867 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || ||||| ||| | || | || ||||| || || ||||| ||||| || ||||| Sbjct 758868 CAATTAGAAGATGGAAGAACATTATCAGATTATAATATCCAAAAGGAATCAACTTTACAT 758927 Query 22423 TTAGTTTTGCGATT 22436 |||||| | || || Sbjct 758928 TTAGTTCTCCGTTT 758941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724199231795