Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq11 170 4e-37 seq13 161 2e-34 >seq11 Length=2227116 Score = 170 bits (188), Expect = 4e-37 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||||| |||| |||||||| || || |||||||| || | | ||| || |||||||| Sbjct 206674 TACCAAATGTAAAGTGGACTCCTTCTGAATGTTATAGTCAGCTAATGTTCTGCCATCTTC 206615 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 || || || || || ||||| | ||| ||||| ||||||||||| |||||||| ||||| Sbjct 206614 TAGTTGTTTTCCTGCAAATATTAATCTCTGTTGATCGGGTGGAATTCCTTCCTTATCTTG 206555 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||| |||||||| || ||| || || || | ||| || || || | |||||||||||| Sbjct 206554 AATTTTTGCCTTAACATTCTCAATCGTATCAGATGACTCGACATCAAGGGTGATGGTTTT 206495 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTA 68468 ||| || | || || |||||||| |||||| || || Sbjct 206494 TCCGGTTAATGTTTTTACGAATATTTGCATTTTGGTA 206458 >seq13 Length=2538962 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || |||| || || || |||||||| |||||||| || | ||| || ||||||||| Sbjct 759160 ACTAAATGTAAAGTAGATTCCTTTTGGATATTATAATCTGATAATGTTCTTCCATCTTCT 759101 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || ||||| | |||||| ||||| |||||||| ||||| || ||||| Sbjct 759100 AATTGTTTTCCTGCAAATATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGT 759041 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||||||||| || || ||||||| ||| || || || | |||||||||||| Sbjct 759040 ATTTTAGCCTTGACGTTTTCAATTGTGTCTGATGACTCAACGTCTAGTGTGATGGTTTTT 758981 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||| || || || ||||| Sbjct 758980 CCTGTTAAAGTCTTTACAAAAATTTGCAT 758952 Score = 149 bits (164), Expect = 1e-30 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || |||| || || || |||||||| |||||||| || | ||| || ||||||||| Sbjct 758932 ACTAAATGTAAAGTTGATTCCTTTTGGATATTATAATCTGATAATGTTCTTCCATCTTCT 758873 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || ||||| | |||||| ||||| |||||||| ||||| || ||||| Sbjct 758872 AATTGTTTTCCTGCAAATATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGT 758813 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||||||||| || || || |||| ||| || || |||| |||||||||||| Sbjct 758812 ATTTTAGCCTTGACGTTTTCAATTGTATCTGATGACTCAACGTCCAGTGTGATGGTTTTT 758753 Query 68433 CC 68434 || Sbjct 758752 CC 758751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921613840431960