Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq11 113 3e-20 seq13 87.8 1e-12 >seq11 Length=2227116 Score = 113 bits (124), Expect = 3e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||||||||| | ||||||||||| || |||||||| ||| | || || | Sbjct 206461 CAAAATGCAAATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTTGATGTCGAGTC 206520 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || ||| | | || ||||| ||||||| ||||| || || | || | Sbjct 206521 ATCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAGGAAGGAATTCCACCCGA 206580 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||||||||| | || ||||| || ||||||||||||||| | ||| | || || || Sbjct 206581 TCAACAGAGATTAATATTTGCAGGAAAACAACTAGAAGATGGCAGAACATTAGCTGACTA 206640 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 || ||||||||||| || ||| | ||| ||||| || Sbjct 206641 TAACATTCAGAAGGAGTCCACTTTACATTTGGTAATA 206677 >seq13 Length=2538962 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/238 (68%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || ||||| || |||||||| || | || || | || Sbjct 758952 ATGCAAATTTTTGTAAAGACTTTAACAGGAAAAACCATCACACTAGACGTTGAGTCATCA 759011 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | | ||| ||||| |||||||| || | ||||| || Sbjct 759012 GACACAATTGAAAACGTCAAGGCTAAAATACAAGATAAAGAAGGAATTCCACCTG---AC 759068 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || || ||| | || ||||| || |||||| |||||||| || ||| | | ||||| Sbjct 759069 CAGCAAAGATTAATATTTGCAGGAAAACAATTAGAAGATGGAAGAACATTATCAGATTAT 759128 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAAT 22068 ||||| || |||||||||||| | ||| | || | |||||| |||| || | ||||| Sbjct 759129 AATATCCAAAAGGAATCTACTTTACATTTAGTTCTCCGTTTAAGAGGTGGTTTTTAAT 759186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358121557068022