Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 2e-12 >seq13 Length=2538962 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 16/218 (7%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTT 114231 ||||||||||| |||||||| ||||| || || ||||| | | || || | ||||| Sbjct 759161 AACTAAATGTAAAGTAGATTCCTTTTGGATATTATAATCTGATAAT-GTTCTTCCATCTT 759103 Query 114232 CAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGG 114291 | | |||||| || || | || | | || ||||| || ||||| |||||||| Sbjct 759102 CTAATTGTTTTCCTGCAAATATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTT----- 759048 Query 114292 CAATCTTTTGTTTTAGC-------TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| | ||||||| | ||||| ||||| | || || ||||| | || Sbjct 759047 --ATCTTGTATTTTAGCCTTGACGTTTTCAATTGTGTCTGATGACTCAACGTCTAGTGTG 758990 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || | ||| ||||||||||| ||||| Sbjct 758989 ATGGTTTTTCCTGTTAAAGTCTTTACAAAAATTTGCAT 758952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130595551716