Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5 114 1e-20 >seq5 Length=1204002 Score = 114 bits (126), Expect = 1e-20 Identities = 258/384 (67%), Gaps = 8/384 (2%) Strand=Plus/Minus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGC 20257 || |||| |||||| |||| || |||| | ||| | | | || || |||| | Sbjct 866329 TGAGCATTTCCCAAAATGTGTATGAACTGTGCAGGTTGCAAATTACATACCTGTGCAATC 866270 Query 20258 ATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCC 20317 |||| || || | |||||| |||||||||||| |||||||| ||||||| || | Sbjct 866269 ATATGTGTGAAAATGGAATAAGAGGCAATGTTAAAGGGAACTCCTAAACCCAAATCACAG 866210 Query 20318 GACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAG 20377 || || ||||||| ||| || | | ||| ||| ||||||||||| ||||| | Sbjct 866209 GATCTTTGATACATAATACATGATAATTTACCATCAAAAACATAAAATTGGCATAAAATA 866150 Query 20378 TGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATT 20437 ||||| || || | ||||| || || ||||| ||||||| ||| ||| Sbjct 866149 TGACAAGGTGGTAATGCCATTTTATCTAAATCTTTTACATTCCATGCACACAAAATAATT 866090 Query 20438 CTTCTA-TCGTGCGGATTATTTTTTATTAAATC---CACAATGTACGACAATTGGTCAAA 20493 || ||| | || || | ||| ||||||||||| |||| | | ||||| |||| Sbjct 866089 CTCCTACTAGT-TGGTTCATTCTTTATTAAATCAATCACATTTT---TTAATTGATCAAC 866034 Query 20494 CCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTG 20553 || | | || |||| | | ||| | | || | || |||||||| |||||||| Sbjct 866033 TCCTTTGTCTTTATAATTATCATGCATATTTGTATATTCAGCACCAAAGTGTCTCCACTG 865974 Query 20554 GAAACCGTAAACAGGTCCCAAATC 20577 ||||| |||| ||| || ||||| Sbjct 865973 AAAACCATAAATAGGCCCTAAATC 865950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441368700750120