Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13 113 1e-19 seq11 105 2e-17 >seq13 Length=2538962 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||||||||| || | | || | ||| |||||||||||||||||||| || Sbjct 759143 TTCCTTTTGGATATTATAATCTGATAATGTTCTTCCATCTTCTAATTGTTTTCCTGCAAA 759084 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | | || || | ||| |||||||||||||| || ||||| || || ||||| Sbjct 759083 TATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGTATTTTAGCCTTGACGTT 759024 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || || || || || || ||||| || || || || | |||||| || Sbjct 759023 TTCAATTGTGTCTGATGACTCAACGTCTAGTGTGATGGTTTTTCCTGTTAAAGTCTTTAC 758964 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 758963 AAAAATTTGCAT 758952 Score = 100 bits (110), Expect = 7e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||||||||| || | | || | ||| |||||||||||||||||||| || Sbjct 758915 TTCCTTTTGGATATTATAATCTGATAATGTTCTTCCATCTTCTAATTGTTTTCCTGCAAA 758856 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | | || || | ||| |||||||||||||| || ||||| || || ||||| Sbjct 758855 TATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGTATTTTAGCCTTGACGTT 758796 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCC 288446 ||| || | ||| || || || || || ||||| || || || Sbjct 758795 TTCAATTGTATCTGATGACTCAACGTCCAGTGTGATGGTTTTTCC 758751 >seq11 Length=2227116 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| || | || | || ||||||| |||||||||||| || Sbjct 206655 TCCTTCTGAATGTTATAGTCAGCTAATGTTCTGCCATCTTCTAGTTGTTTTCCTGCAAAT 206596 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | | ||||||| ||| |||||||| ||||| || ||||| || || || || Sbjct 206595 ATTAATCTCTGTTGATCGGGTGGAATTCCTTCCTTATCTTGAATTTTTGCCTTAACATTC 206536 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || ||||| || || ||||| | || || ||| Sbjct 206535 TCAATCGTATCAGATGACTCGACATCAAGGGTGATGGTTTTTCCGGTTAATGTTTTTACG 206476 Query 288463 AATATCTGCATTATGTTA 288480 ||||| |||||| || || Sbjct 206475 AATATTTGCATTTTGGTA 206458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179643170058754