Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11 100 3e-16 >seq11 Length=2227116 Score = 100 bits (110), Expect = 3e-16 Identities = 159/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 38232 CTCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGAC 38291 || |||| ||||||||||||||||||||||| | || || |||||||||||| | || Sbjct 206453 CTTTTTACCAAAATGCAAATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTTGAT 206512 Query 38292 GTCGAGGCCACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAAT 38350 |||||| | | || | | || || | |||| | |||||| | || || || ||||| Sbjct 206513 GTCGAGTCATCTGATACGATTGAGAATG-TTAAGGCAAAAATTCAAGATAAGGAAGGAAT 206571 Query 38351 TCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCT 38410 ||| |||| |||||| | | || | || || ||||| || || || | || | | | Sbjct 206572 TCCACCCGATCAACAGAGATTAATATTTGCAGGAAAACAACTAGAAGATG-GCAGAACAT 206630 Query 38411 CAAC-GACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 | | ||||| ||||| || ||||| | || | |||||||| Sbjct 206631 TAGCTGACTATAACATTCAGAAGGAGTCCACTTTACATTTGGT 206673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168154645120