Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5 627 7e-174 seq7 392 2e-103 seq4 154 1e-31 seq9 123 2e-22 seq13 104 2e-16 seq8 95.1 9e-14 >seq5 Length=1204002 Score = 627 bits (694), Expect = 7e-174 Identities = 1123/1622 (69%), Gaps = 56/1622 (3%) Strand=Plus/Plus Query 517131 TTTTCTTGTTATCTGCTTCTTC------AAATTCTTTAGCTTCTCTAATCATTCTCTCAA 517184 |||||||||| ||| | ||||| | ||| || ||| || ||| ||| | |||| Sbjct 496046 TTTTCTTGTTCTCTTCATCTTCTGCTTTATATTTTTCAGCATCATTAACCATACGATCAA 496105 Query 517185 TTTGATCTTCAG---AGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGT 517241 ||| |||||| | |||||||| || ||| ||||| ||||||| || |||| Sbjct 496106 TTT---CTTCAGGTGATAATCTTCCTTTATCATTGGTAATGGTAATATGATT----TTGT 496158 Query 517242 TT----GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 517297 || || ||||| ||| | || || || || | |||||||| ||||| | ||| || Sbjct 496159 TTTCCCGTAGATTTTTCAACAGCTGTAACGTTTAATATACCATTAGCATCAATATCGAAA 496218 Query 517298 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 517357 || ||||||||||| || || ||| | |||||||| || || || || | |||| | Sbjct 496219 GTAACTTCAATTTGTGGAACTTTTCTTGGTGCAGGTGGAATACCATCTAAGTGAAATTTA 496278 Query 517358 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 517417 || | ||||||||| || || | || ||| || ||| | | |||||| || Sbjct 496279 CCTAATAAATTATTATCCTTTGTTAGAGCTCTTTCTCCTTCGTATACTTGGATTAAGACA 496338 Query 517418 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGT 517476 | | ||||||||| | ||| || ||||| | | || | || || || || || || Sbjct 496339 CCTGGTTGATTATCAGCATAGGTAGTAAAAATT-TGACTCTTCTTTGCTGGGATAGTGGT 496397 Query 517477 GTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGG 517536 ||||| || || | |||||||||| ||||||||||||||||||||| | || | | Sbjct 496398 ATTTCTTTCTATCAATTTGGTCATAACACCACCTGCTGTTTCTAAACCTAAGGATAATGA 496457 Query 517537 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAAT 517593 | || || | || | | || ||| | | || | |||| || || | || Sbjct 496458 ACATACGTCTAACAGTAATAAATCTTGCACTG---CAGTGGATTGATCACCAGATAATAT 496514 Query 517594 AGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG 517653 ||||||||||| ||| ||||||||||||||||||||||| || || | | | | Sbjct 496515 AGCTGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTGATGGATCTACAAGC 496574 Query 517654 TTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCC 517713 || || ||||| ||||| | | || |||| | || || ||||| | | ||| || Sbjct 496575 TTCCTTTCCATTAAAAAATTCTTTAATAAGTGTTTGTATTTTTGGAATTCTTGTTGAACC 496634 Query 517714 TCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTT 517773 |||||||| |||| ||| || || | ||||||| | | ||| ||| || || Sbjct 496635 TCCAACTAGAACAACTTCGTGTACACTTTTCTTATCCATCATGGCATCTTTTAACACCTT 496694 Query 517774 TTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 517833 ||| || || || | | || | || ||| | |||||| ||| | ||||| Sbjct 496695 TTCCACTGGGATGAGTGTATCACGGAAATAATCAATACATAATTCTTCAAATCTTGCTCT 496754 Query 517834 AGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 517893 | | | || || |||||||||| ||||| || || ||||||| ||| || || | ||| Sbjct 496755 ACTTACTGTTACGCTATAATCAATACCTTCAAATAAGGAATCAATTTCGATGGTTGCTTG 496814 Query 517894 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 517953 || ||||| |||| || | ||||| | ||||||| || |||| ||||| || || Sbjct 496815 TGTAGAAGAGGATAATGTTCTCTTAGCTCTTTCACATTGAGTTCTTAATCTTCTCAAAGC 496874 Query 517954 TTTTGCTGATTGATTCAAATCTGTTTT-----ATATTTTCTCTTGAAATCTTCAACACAC 518008 | | ||| ||| || | | | |||| || |||||| || |||||||||||||| Sbjct 496875 TCT-GCT-ATTTTTTGATAAGTCTTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAA 496932 Query 518009 CATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 518068 | |||| | | || |||||||||||||| || | | |||| ||| | || ||| Sbjct 496933 AAGTTTACTAATCTGTTGTCAAAATCTTCACCCCCTAGGTGTGTATCTCCAGCAGTTGCT 496992 Query 518069 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCC 518128 | |||| |||| |||||||||| || | |||| |||||| || || || || Sbjct 496993 TTCACTTCAAAAATACCATCTTCAATAGTTAGTAGAGAAACATCAAATGTACCTCCTCCT 497052 Query 518129 ATATCAAAAATAAGTACATTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCAA 518186 | ||| ||||| | | |||| ||||| || || | || || | | ||||| || | Sbjct 497053 AAATCGAAAATTAAAATATTCTTTTCTCCTTTTCCT--TTCTTGTGTAATCCATATGCTA 497110 Query 518187 AAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTG 518246 ||| || ||||||||||| ||||||||||||| ||||| | ||||||||| |||||| Sbjct 497111 TAGCTGCTGCAGTTGGTTCGTTAATAATTCTCATGACATTCAAACCAGCAATGGTTCCTG 497170 Query 518247 CATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 ||||||| || ||||||||||| ||||| ||||||||||||||||| || ||||| |||| Sbjct 497171 CATCTTTTGTTGCTTGTCTTTGAGAATCATTAAAATATGCAGGAACTGTGATAACTGCAT 497230 Query 518307 CAGTTACTTCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCAT 518364 | | | ||| || | | ||| |||| || ||| ||||||||| |||| ||| Sbjct 497231 TCTTAATTGATTTTCCTAAA-AAG-GCTTCAGCATTTTCTTTCATTTTTTGCAAAACCAT 497288 Query 518365 TGATGAAATTTGTTCTGGGG--AATA-TTGCTTGGATTCATTTTGATATGATACTTCAAA 518421 || ||||||| ||||||| |||| || ||| ||| |||||| ||||||| Sbjct 497289 AGAGGAAATTTCTTCTGGGTGAAATAATTTCTT---TTCTCCTTGATAGCTAACTTCAAT 497345 Query 518422 ATATGGTTTATTACCAAC-----ATTAATAACTTTAAATGGCCAGTATTTCATATCTGAT 518476 ||| || | | |||| ||| | || |||||||||| | ||||||||| | Sbjct 497346 CATTGGCTTTTCATCAACTCCTGATT--TTACAGTAAATGGCCAATGTTTCATATCACTT 497403 Query 518477 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 518536 || || | || |||| | || |||||||||| |||||||||||||| || || Sbjct 497404 TGGACTGATGATTCGGTAAATTTCCTTCCAATTAATCTTTTTGCATCAAAAACCGTGTTT 497463 Query 518537 GTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTA 518596 |||||| |||| |||||| ||| || ||||||||||| | ||| || ||||| Sbjct 497464 TCTGGATTTCTTGCTACTTGATTTTTTGCAGCATCTCCAATTAATCTTTCGGTATCTGTG 497523 Query 518597 AATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA 518656 || | ||| || |||||||| || | || ||||||||||| |||||||| || || || Sbjct 497524 AACGCAACGTACGATGGAGTAGTTCTGTTTCCTTGATCATTTGCAATAATATCTACATTT 497583 Query 518657 CCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 518716 ||||| ||||||||||||||| | | || || ||||| |||||||||||||| || Sbjct 497584 TCATTTCTCCATACACCTACACAGGAATATGTCGTACCTAAGTCAATACCAATAGCGATG 497643 Query 518717 TT 518718 || Sbjct 497644 TT 497645 Score = 111 bits (122), Expect = 1e-18 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 322240 TAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACC 322299 ||| || ||||| | |||||||||||||||||| ||||| ||| | | |||| ||||| Sbjct 497097 TAATCCATATGCTATAGCTGCTGCAGTTGGTTCGTTAATAATTCTCATGACATTCAAACC 497156 Query 322300 CGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTAC 322359 ||||| | | | ||| ||||||||||| || | |||||||||||||| || || Sbjct 497157 AGCAATGGTTCCTGCATCTTTTGTTGCTTGTCTTTGAGAATCATTAAAATATGCAGGAAC 497216 Query 322360 AGTAATAACTGCTTTATTAATAGGTTTTTGTAAA 322393 || |||||||| || ||||| | |||| |||| Sbjct 497217 TGTGATAACTGCATTCTTAATTGATTTTCCTAAA 497250 >seq7 Length=1639955 Score = 392 bits (434), Expect = 2e-103 Identities = 1059/1595 (66%), Gaps = 49/1595 (3%) Strand=Plus/Minus Query 517136 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 517195 || |||||| | || |||| | || || || |||||||| | |||||||| || | Sbjct 773530 TTCTTATCTTCATCAGCAAACTTTTCTGCATCATTAATCATTTTTTCAATTTGTTCCTTT 773471 Query 517196 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCA 517255 || |||||||| || ||| ||||| |||||| ||| ||| || |||||| Sbjct 773470 GATAATCTTCCTTTATCATTTGTAATCGTAATACCTTTGCTTTTTCCAGTACCTTTATCT 773411 Query 517256 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 517315 | || |||| | ||||||||| || | |||||| |||||||||| ||| Sbjct 773410 TCTGCTTCTACATGCAAAATACCATTTTTGTCAACTGTAAATGTAACTTCAATTTTAGGA 773351 Query 517316 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 517375 || ||||||||||| ||||| || || ||| | |||| |||||| | ||||||| Sbjct 773350 ACTCCTCTCTGAGCTGGTGGAATTCCAGACAATTCAAATTTTCCCAACAAGTGATTATCT 773291 Query 517376 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAA 517435 || || ||| || ||| || ||||| | ||| || |||| | | |||||||||| | Sbjct 773290 TTTGTTAATGCTCTTTCTCCTTCGAATACTTGAATTAGAACTGCTGGTTGATTATCTTGA 773231 Query 517436 TAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 517495 || || | |||| | ||||| || ||||| |||||||| | ||||| | Sbjct 773230 TACGTCGAAAATGTTTGCGATTTCTTGGTTGGAATAACAGTGTTTCTTTTAATAAGTTGT 773171 Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||||||||| || | ||||| | ||| | || | |||||| ||||| | || || Sbjct 773170 GTCATAATACCTCCAACAGTTTCAATACCTAAAGTTAAAGGAGTTACATCTAACAGCACT 773111 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || ||| | || ||| ||| | | |||| | ||||| || ||||||||| Sbjct 773110 ACATCTTGTAATTCTTC---------ACCTAATATAATACCGGCTTGTATTGCAGCACCA 773060 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 ||||| ||||||||||||||||||| | | || ||| ||| ||||| ||||| | | Sbjct 773059 TATGCTACAGCTTCATCAGGATTAATACCTCTGTTGGGTTCTTTTCCATTAAAAAATTCT 773000 Query 517676 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 || || |||| | || || ||||||| || || ||||||| ||||||||||| | Sbjct 772999 TTAATAATTTGTTGAATTTTTGGTATACGAGTAGAACCACCAACTAGTACAATTTCAT-C 772941 Query 517736 ACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 | | | | || || || | ||| |||||| |||| || ||||| | | Sbjct 772940 AATTTTACTCTTTTCATACTTAGCATCATCTAAAACCTTTTTCACAGGTTCTAATGTTTC 772881 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 ||| || || || | | |||||| ||||| |||||||| | || | | | || | Sbjct 772880 TCTGAATAAATCATCATTTAATTCTTCAAATTTTGCTCTAGTTAATGTTTC-TGAAAAAC 772822 Query 517855 AAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA-AGATAGTGCA 517912 || |||||| | | | |||| ||| || || |||| | || | |||| Sbjct 772821 TATGTCCTTCTACAATATCTTCAATTTCTATTTGAG-TTGAATGGACTACTGATAAATTT 772763 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAA 517971 | ||| ||| ||| | || | |||| | || | | ||||| || || |||| || Sbjct 772762 CTTTTTGCAATTTCTACTTCTTTTCTTAATTTTTGAATTGCTTT--CTTATCTGATCGAA 772705 Query 517972 -ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACGATTATC 518028 ||| | || |||| |||| ||| || || | | || | || | | | ||| Sbjct 772704 GATCGATATTCGTTTTTTTCTTAAAAATTTTAATAAA--ATAATCCATTACTCTCTGATC 772647 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 ||||||||| ||||| || | ||||| || | || || |||| |||| |||| Sbjct 772646 AAAATCTTCTCCTCCTAAATGTGTATTACCAGCAGTTGCATACACTTCAAAAACACCATT 772587 Query 518089 TTCAAGAGACAA-AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 || | | |||| || || |||||| || |||||||| | ||| | | | || | Sbjct 772586 ATCGATA-ACAAGAATAGAAACATCAAATGTACCACCACCTAAATCGTATACTAATATAC 772528 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 | ||||| ||| |||||||| | ||||| || ||||||||||| |||||||| | Sbjct 772527 TAGTTTCT---TCT---TTTTTATCTAATCCATATGCCAAAGCAGCAGCTGTTGGTTCGT 772474 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 | || || | | || || | ||| ||||| ||||||| ||||| || |||||||||| Sbjct 772473 TTATTATACGTACAATGTTCAAACCTGCAATAGTTCCTGCGTCTTTTGTTGCTTGTCTTT 772414 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | | ||| || |||||||||||||| || | ||| |||| |||| ||| || | | Sbjct 772413 GAGCATCATTGAAATATGCAGGAACTGTTACAACAGCATTCTTTACAGATTTCCCTAAAA 772354 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-GGAA 518386 | | ||| ||| |||||| || ||||| ||| | |||||||| || | || Sbjct 772353 ATGATTGTGCTATTTCTTTCATCTTTTCTAAAACCATAGCACTGATTTGTTCAGGTGCAA 772294 Query 518387 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG-TTTATTACCAACATTAAT 518445 | | | || ||| || ||| ||| | || ||| ||| | || ||| | Sbjct 772293 AAGTAGTCTTTTTGTCTTTTATCTGA-ACTCTTATATTTGGCTTTCCTTCC-TGATTTAC 772236 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 | || | |||| | || ||||| | ||| ||| |||| || | ||| || Sbjct 772235 TATTTCATATGGTAATAATGATCTATCTCTTACAACTTCTTGATCATCGAATTTTCTTCC 772176 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 |||||| ||||| |||| || | ||| | ||||| | | || ||||| |||| || Sbjct 772175 AATTAAACGTTTCACATCGAATACAGTTTGTGTTGGGTGTAATGTAGCTTCTAATTTTGC 772116 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATATGATGGAGTTGTGC 518621 ||| ||||| | | | || |||| | ||| ||||| || |||||||| | | Sbjct 772115 TGCCTCTCCCA----CTTTCCTTTCTCCATCCACAAAAGAAACGTACGATGGAGTAATAC 772060 Query 518622 GATTACC---TTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 |||| || || || ||| |||| ||||||||| | ||||||| | ||||| |||| Sbjct 772059 GATTTCCCAATTCATTATT--CAAT-ATTTCAACTCTTCCATTTTTGAAAACACCAACAC 772003 Query 518679 AACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 |||| | ||||||||||| || || |||||| || Sbjct 772002 AACTGTATGTTGTTCCTAAGTCGATTCCAATAACA 771968 Score = 98.7 bits (108), Expect = 8e-15 Identities = 205/303 (68%), Gaps = 17/303 (6%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGC-TAATGTTCTAAATACTCC 322143 ||||||||||||||||| ||||||||||||||| | ||| || ||| ||| || || Sbjct 772648 TCAAAATCTTCTCCTCCTAAATGTGTATTACCAGCAGTTGCATACACTTC-AAAAACACC 772590 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 ||| |||| | | |||||||| || || ||| | ||||| || || || | || Sbjct 772589 ATTATCGATAACAAGAATAGAAACATCAAATGTACCACCACCTAAATCGTATACTAATA- 772531 Query 322204 GTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGC 322263 || ||||| || | |||| | |||| || ||||| | ||| || || Sbjct 772530 -----TACTAGTTTCTT-----CTTTTT----TATCTAATCCATATGCCAAAGCAGCAGC 772485 Query 322264 AGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGT 322323 |||||||| || ||||| | || | ||||| ||||| | | | || || Sbjct 772484 TGTTGGTTCGTTTATTATACGTACAATGTTCAAACCTGCAATAGTTCCTGCGTCTTTTGT 772425 Query 322324 TGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGG 322383 ||||||||| || || ||||| |||||||| || || || | ||| || || || | || Sbjct 772424 TGCTTGTCTTTGAGCATCATTGAAATATGCAGGAACTGTTACAACAGCATTCTTTACAGA 772365 Query 322384 TTT 322386 ||| Sbjct 772364 TTT 772362 >seq4 Length=941946 Score = 154 bits (170), Expect = 1e-31 Identities = 314/462 (68%), Gaps = 12/462 (3%) Strand=Plus/Plus Query 303735 AAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGTTGGTCC 303794 ||| || ||||| |||||||| ||||||| | ||||| |||| | | ||| || Sbjct 270713 AAGACCCCCATCCCTTGATCTTCCTTCTGTTGGTTGTCGCGTAATCATAGTTAATGGACC 270772 Query 303795 ACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGG 303854 | | | || || ||||| | ||||| ||||| ||||| ||||||||||| || Sbjct 270773 TCTACTTCTTGCATGTATTTTGTCTTCCACCATATGTTTTAATCTTTGATAATATGTTGG 270832 Query 303855 ACCAATAAAAATTTTAACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATT 303914 || ||||| ||||| | ||| |||| ||||| |||||||||| | | ||||| Sbjct 270833 CCCTATAAATATTTTTGATTTTAACATTTTCCCATTATGACCATTATACAAAATATCATT 270892 Query 303915 ACCCCATTCTTCATAACCAGCAGCAACTAATTCATCGTT----AATGGCATTAAGATCAA 303970 ||| ||| |||||| || || || | ||| || ||| | | || | || Sbjct 270893 ACCATATTTTTCATATCCTA----AATTATGTAATCTTTGAGAAATTTCTTGAACAGTAA 270948 Query 303971 CACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATA 304030 ||| ||||||||||||||| || | |||||| || ||| || |||||| || Sbjct 270949 TTTTTGAAAATGGTGTTGCATCTCCTTCTGCTCCTTCAATCGCAGCTACTTTTCCAGCTA 271008 Query 304031 AACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAA 304090 |||||||| | || |||||||||||||| || | || || || ||||||| Sbjct 271009 GACATTCAACCAAATGTCCAATAGTCATACGAGAAGGAACTGCATGTGGGTTCATAATAA 271068 Query 304091 TATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTA--TCC 304148 |||| |||| |||| | ||||||| ||||||| || | | | | |||| ||| Sbjct 271069 TATCAGGAAAAGTTCCATCTGAACTGAATGGCATATCTTCT-GTTCTG-TATGTAATTCC 271126 Query 304149 AATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACC 304190 ||| || ||||||||||| ||| | |||||||||||| Sbjct 271127 AATTGTTCCTTTTTGACCATGTCTACTTGCAAATTTATCACC 271168 >seq9 Length=2239043 Score = 123 bits (136), Expect = 2e-22 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 322236 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 322295 || |||| || |||| | |||||||||||||||||| ||||| || ||| ||||| | Sbjct 1480454 TTTCTAATCCAAATGCTAAAGCTGCTGCAGTTGGTTCGTTAATAATACGAAGTACATCCA 1480395 Query 322296 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 322355 |||| |||||||| ||| ||| |||||||| || |||| |||||| ||||| || | Sbjct 1480394 AACCAGCAATTTTTCCAGCATCTTTCGTTGCTTGCCTTTGTGAGTCATTGAAATACGCAG 1480335 Query 322356 GTACAGTAATAACTGCTT 322373 ||||||||||||| |||| Sbjct 1480334 GTACAGTAATAACAGCTT 1480317 Score = 122 bits (134), Expect = 7e-22 Identities = 229/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 || |||||||| ||||| || || || || ||| ||| | |||| |||| || Sbjct 1480590 TCGAAATCTTCCCCTCCTAAGGATGTGTTACCATTCGTTGCTTTCACTTCAAAAACACCT 1480531 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || || ||||| || | |||| || ||||| || | |||| ||| | || Sbjct 1480530 CCTAGAATTTCCAAAATAGAAATATCAAATGTACCACCTCCTAAATCATAAACAG---CA 1480474 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 | | |||| | | | | || || | ||| | || ||||| || ||||||||||| Sbjct 1480473 ATAA---CTTTTCCATCGCTCTTTTCTAATCCAAATGCTAAAGCTGCTGCAGTTGGTTCG 1480417 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 |||||||| | | |||| | |||||||||| |||| |||||||| || ||||| ||| Sbjct 1480416 TTAATAATACGAAGTACATCCAAACCAGCAATTTTTCCAGCATCTTTCGTTGCTTGCCTT 1480357 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 ||||| || || ||||| ||||| ||||||||||| || | ||||| | | || | | Sbjct 1480356 TGTGAGTCATTGAAATACGCAGGTACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAA 1480297 Query 518327 TAAGCGCTTGCCGTTTGTTTCAT-TTTACTTAAA 518359 ||| || |||| |||||| ||| || ||| Sbjct 1480296 TAATTTTCAGCAGTTTCTTTCATCTTTTCTAAAA 1480263 Score = 116 bits (128), Expect = 3e-20 Identities = 383/584 (66%), Gaps = 26/584 (4%) Strand=Plus/Minus Query 517068 TAACTGCTTGTTTAACACTGTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAG 517127 |||||| || | | | ||||| | | | ||||| ||||||||| ||||| | Sbjct 1481542 TAACTGTTTTTCTGA-ACTGTAAATTAACGTTTCTGCTTCATTTTTCGAATCTGTTAGAT 1481484 Query 517128 CTTTTTTCTTGTT-ATCTGCTTCTTCAAATTC--TTTAGCTTCTCTAATCATTCTCTCAA 517184 |||||| ||||| ||| ||| | | |||| || ||||||| || |||| | |||| Sbjct 1481483 TTTTTTT-TTGTTGATC--CTTTTCCCTATTCAATTCAGCTTCTTGAACCATTTTTTCAA 1481427 Query 517185 TTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTG-TTT 517243 ||| |||| || | || | | | | | || ||||| || ||| ||| ||| Sbjct 1481426 TTTCTTCTTTGCTTAAACCACCACTACTTTGA---ATGGTAAT-TTGTTGTTTTTTATTT 1481371 Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || ||| ||| |||| | |||| |||| |||| ||||| | ||| ||||| ||| Sbjct 1481370 GTCATTTTGTCAATAGCAGATATGTTAATAATAGCATTAGCATCAACATCGAATGTAACT 1481311 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 |||||||| || || ||||| | || || || || || | |||| ||| | ||| | Sbjct 1481310 TCAATTTGTGGAACTCCTCTAGGTGCTGGAGGAATTCCAACTAAATCAAAAGATCCTAAC 1481251 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 | || || || | | || || ||| || | |||| || ||| | ||| ||| Sbjct 1481250 ATTTTGTTGTCACATGCCATTTCTCTTTCTCCTTGAAAAACTTTAATACTGACTTGTGTT 1481191 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCT 517482 |||||||| | || | ||| | |||| ||||| || || || ||||||||||| Sbjct 1481190 TGATTATCAGCTGCTGTGGAAAAGA-TCTGTGATTTCTTTGTTGGTATAGTTGTGTTTCT 1481132 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 || ||| | ||||| | || |||||| |||||||| ||| | || | ||| | || Sbjct 1481131 ATTAATCAATTTGGTGAAAACTCCACCTAATGTTTCTATACCTAAGGATAATGGAATTAC 1481072 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 517602 ||| | || | | || || || | || ||| || | | || |||| Sbjct 1481071 ATCTAAGAGCAACAAATCTT----TTATCTCTCCTTTTAAC--------ACACCTCCTTG 1481024 Query 517603 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTT 517646 ||||| ||||| ||||||| |||||||| || || ||| ||| Sbjct 1481023 GATAGCTGCACCTAATGCAACTGCTTCATCTGGGTTTACACTTT 1480980 >seq13 Length=2538962 Score = 104 bits (114), Expect = 2e-16 Identities = 937/1501 (62%), Gaps = 67/1501 (4%) Strand=Plus/Plus Query 398928 AAAATTGTTGAACGTCCTCAACACTTATTTATGAGAGTAGCTATTACACTCCATTACAGG 398987 |||||| ||||| | || ||||| || || ||||||||| ||||| | ||||| Sbjct 814229 AAAATTATTGAAAGACCACAACATTTGTTAATGAGAGTATCTATTGGAATCCAT------ 814282 Query 398988 AAAAATGATCTCGACAGGATATTTGAAACTTATAAATATTTATCTAAAGGATATTTTACT 399047 | | ||| | || | | ||||||| ||| | | | || | |||||| || Sbjct 814283 ATTGACGATTTGGAAAAAGCACTTGAAACATATCACTTAATGTCACAGAAATATTTCACA 814342 Query 399048 CACGCAACACCTACATTATTTAATGCTGGTACAACACATGAACAACTTTCAAGTTGTTTT 399107 || ||||| ||||||||||| ||| |||| || || |||| | || |||||| Sbjct 814343 CATGCAACTCCTACATTATTCAATTCTGGAACTCCAAGACCACAAATGTCTTCGTGTTTT 814402 Query 399108 TTATTGGGTATTGGT---GATTCTCTTGAAGAAATCAGTGAATGTTGGAAAGAATGTGCT 399164 ||||| || ||||| | |||| ||| ||| | |||| ||||||| Sbjct 814403 TTATTATCAATGAAATCAGATTCGATAGAAGGAATTTTCGAAACATTGAAACAATGTGCA 814462 Query 399165 TTAATCAGTAAACATGCAGGAGGAATTGGAATACATATGACTAATATTAGAGTTGAAGGA 399224 ||||| || ||| || || || |||||| | || |||| |||| | || Sbjct 814463 TTAATTAGCAAAACAGCTGGTGGTATTGGAGTTGCAGTGCAAGATATAAGAGGTCAAAAT 814522 Query 399225 GCATATATAGCTTCAACACAAGGAGAAGCAGGTGGTTTAAGAGTTTTGACTA----TTTT 399280 ||||||| ||| | ||| | | || ||| | | || ||| | || Sbjct 814523 TCATATATTAGAGGAACGAATGGAATATCCAACGGATTAGTACCTATG-CTAAGAGTATT 814581 Query 399281 CAATGATATTTCAAGATACGCAAATCAAGGTGGT---AAACGACCCGGTTCTTTTGCTAT 399337 |||||||| | | ||||| | | ||||||| || ||| || || ||||||||| | Sbjct 814582 CAATGATACTGCTAGATATGTAGATCAAGGAGGAGGGAAAAGAAAAGGATCTTTTGCTGT 814641 Query 399338 TTTTATTGAACCGTGGCATGGAGACATATTCTTTTTTCTAGATCTCAAGAAAAATACTGG 399397 | |||||||| |||||| ||||| || ||| ||||| | | |||||| ||| Sbjct 814642 ATACATTGAACCATGGCATTCTGACATTTTTGAATTTTTAGATTTAAGAAAAAATCATGG 814701 Query 399398 AGCAGAAACAGAAAGAGCCAGAGATTTATTTTTGGGTTTGATGATTAATGACATTTTCAT 399457 | |||| | |||||| ||||| | || | | | || | || || |||| || Sbjct 814702 AAAAGAAGAATTAAGAGCTCGAGATCTTTTCTATGCTGTGTGGGTTCCAGATCTTTTTAT 814761 Query 399458 GGAAAGAGTTTATAAAGACGATGTTTGGTCATTAATGTGTCCGTCTCAATGTCCTAATCT 399517 | |||||||| | || | | |||| | ||||||||||| | | ||||| | Sbjct 814762 GAAAAGAGTTAAAGAAAATAAAAATTGGACTTTAATGTGTCCAAATGAGTGTCCAGGGTT 814821 Query 399518 TCTCAATAAATACGGAGACGAATTCACCAAAGAATATCTTAAATATGAAAGTGAAGGTAT 399577 | | | || || || ||||| || |||| |||||||| |||| | Sbjct 814822 AAGCGAAACATGGGGTGAAGAATTTGAAAAGTTATATACAAAATATGAG---GAAGAAAA 814878 Query 399578 TTATTTGAAACAAATAAG----AGCTATTGATTTATGGTT--CAAGATTATGGAGTCCCA 399631 || | || ||| || ||| ||||||||||| | | |||| ||| ||| Sbjct 814879 C-ATGGGGAAAAAAACAGTCTTAGCACAAGATTTATGGTTTGCTATATTACAGAG--CCA 814935 Query 399632 AATTGAGACAGGAGTTCCGTATGTTATGTTCAAAGATGCGATTAATGACAAATCAAATCA 399691 || || ||||| || || || | | | |||||| || |||| ||||| ||||| Sbjct 814936 GATAGAAACAGGTGTCCCTTACATGCTTTATAAAGATTCGTGTAATTCTAAATCGAATCA 814995 Query 399692 AATTAATATTGGTGTTGTTAATGGTTCAAATTTATGTTGTGAAATTGTGGAAG-----TA 399746 | ||| | || | | || || || ||||||||||| ||| | ||| | Sbjct 814996 GAAAAATTTAGGAACTATAAAATGTAGTAACTTATGTTGTGAGATTATTGAATACACATC 815055 Query 399747 TCC-GACAAAAATAATTTCTCAGTATGTAATTTATCATCAATTTG--TCTGCCGAGATTT 399803 ||| || || || || ||||||||| | |||| || | ||| | |||| Sbjct 815056 TCCTGATGAAG----TTGCT--GTATGTAATCTGGCATCTATAGCATTATGC--AAATTT 815107 Query 399804 GTTAAAATTATTGATGAAGTCCCAACTTTCAATTACCAAAAATTATTCAAGATTAGTCGT 399863 || | || || ||| || || |||| | ||| | | | | |||| Sbjct 815108 GTAGA---TACAGA-GAAAAAAGAATTT--AATTTTAAGAAACTTTACCAAATTACAAAA 815161 Query 399864 ATTCTCACTCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAACT 399923 ||| | || || ||| | |||| ||||| || | |||| || || | || || || Sbjct 815162 ATTATTACACGAAATTTGGATAAAATTATAGAAAGAAATTATTACCCAGTTGAAGAAGCT 815221 Query 399924 CGGATTACCAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTAGCTGATGTA 399983 | | ||||| | || | || || || || || ||||| ||||| |||||| Sbjct 815222 AGAAGATCCAATACAAGACATAGACCAATAGGAATAGGGGTTCAAGGATTGGCTGATACT 815281 Query 399984 TTTGCTATGTT--TAAGAC-TCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTAAA 400040 ||| ||||| ||||| ||| | ||| || || |||| || | ||| | | Sbjct 815282 TTT---ATGTTATTAAGATATCCCTATGAATCAGATTCTGCTAAAGAATTAAATAAAAGA 815338 Query 400041 ATTTTCGAAACAATTTATTATGGAGCTTTAACAGAATCCAATAAACTTGCTAGAGAATTT 400100 ||||| ||||| || ||||||| ||||| | || | || | ||| || | | Sbjct 815339 ATTTTTGAAACTATGTATTATGCTGCTTTGGAAATGTCTATGGAATTGGCTCAAGTGTAT 815398 Query 400101 GGTACATATCAAACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGATCTT 400160 || | ||| |||| ||||| || ||||| | |||||||| || |||||||| | Sbjct 815399 GGACCTTATGAAACATATCAGGGTAGTCCAGCTAGTCAAGGAATTTTACAATTTGACATG 815458 Query 400161 TGGAATTTCGA--TAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCAAG 400218 |||||| | | | || | || | | ||||| |||||| ||||| | | || Sbjct 815459 TGGAATGTAAAGGTTGATAATAAAT-ATTGGAAT-TGGGAT---GAACTAAAGACTAAAA 815513 Query 400219 AAATTTTAAATCATGGTGTTCGTAATAGTCTAGTTACAACCTGTATGCCAACTGCAAGTA 400278 || || ||||| | | ||| || || | |||||||||||| || Sbjct 815514 TAAAG---AAACATGGATTGAGGAATTCATTACTTCTGGCTCCAATGCCAACTGCATCTA 815570 Query 400279 CTTCTCAAATTATGGGATGGAATGAATGTATTGAACCTTATACAGAAAATATTTATTCAA 400338 |||| |||||| ||||| ||||||| ||||||| ||||| || || || | | Sbjct 815571 CTTCGCAAATTCTGGGAAATAATGAATCCTTTGAACCATATACTAGTAACATCTACTACA 815630 Query 400339 GAAGTACTATGGCTGGAGAATATTTTGTGATTAATAAACATCTCATAAAAGATCTTATTG 400398 || || | || |||||||| ||| || ||||| |||||| ||||||||||| ||| Sbjct 815631 GACGTGTTCTGAGTGGAGAATTTTTCGTAGTTAATCCACATCTGCTAAAAGATCTTTTTG 815690 Query 400399 A 400399 | Sbjct 815691 A 815691 >seq8 Length=1849747 Score = 95.1 bits (104), Expect = 9e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 200572 ATTCATTATAATGATGAGGAAATTTCAAATCGATTCCACCAAAATGAATATCAATACTAT 200631 ||||||||| |||||| |||||| ||||| || |||||| ||| ||||||| | || Sbjct 718131 ATTCATTATCATGATGTGGAAATCGTAAATCTATACCACCACTATGTATATCAAGAACAT 718190 Query 200632 TTCCTAATGTTTTCTTGATCATGGCTGAACATTCAATATGCCAACCAGGT 200681 |||||||| | || | ||| | |||||||||||||||||| |||||| Sbjct 718191 TTCCTAATATGTTACTAGCCATTGTTGAACATTCAATATGCCACCCAGGT 718240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780785529892558