Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq11 105 6e-18 >seq11 Length=2227116 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||||||||| |||||||||||||| || |||||||| ||| || || | Sbjct 206462 AAAATGCAAATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTTGATGTCGAGTCA 206521 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || ||| | | || | ||| |||||| || || || ||| | || ||| Sbjct 206522 TCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAGGAAGGAATTCCACCCGAT 206581 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||||||| | || ||||| || |||||| | |||||| | ||| | || || ||| Sbjct 206582 CAACAGAGATTAATATTTGCAGGAAAACAACTAGAAGATGGCAGAACATTAGCTGACTAT 206641 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 |||||||| || || || ||| | || ||||| || Sbjct 206642 AACATTCAGAAGGAGTCCACTTTACATTTGGTAATA 206677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425400947826597