Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq14 104 3e-17 >seq14 Length=3327155 Score = 104 bits (114), Expect = 3e-17 Identities = 163/228 (71%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 47773 ACAGAATATTGATTTCCTGTG-GCA-ATAACAAAATCATCAGGTTCTTCTTGTTGAAGCA 47830 ||||| | ||| ||| | || ||| || ||||||||||| | || | |||||| | || Sbjct 1189210 ACAGAGTGTTG--TTCATTTGAGCATATTACAAAATCATCTGCATCATGTTGTTGTAACA 1189267 Query 47831 TTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCA--GTCACGAAGTGCATCAAG 47888 |||| |||| || | ||||||||| | ||||| ||||| || | ||||| |||| Sbjct 1189268 TTAAATACATTGCATATACATAATCTTTTGCATGCCCCCAATCTCTCCAAGTG--TCAAT 1189325 Query 47889 ATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAAT 47948 ||| |||| || || | ||| | |||| | | ||| | || | || ||||||| Sbjct 1189326 ATTACCTAATGTTATGCACTTTTGTATGCCTTTACATATTTTTGCTATTCCTTTTGTAAT 1189385 Query 47949 CTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAA 47996 || ||||||||||||||| || | ||| ||| |||||||||||| Sbjct 1189386 TTTCTTAGTTACAAAAGTTTCTCCTCTTCTCGGACTTTCATGATTAAA 1189433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665488219220760