Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 1e-11 >seq11 Length=2227116 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| | || | | |||| || ||||| ||||| || || Sbjct 206656 CTCCTTCTGAATGTTATAGTCAGCTAATGTTCTGCCATCTTCTAGTTGTTTTCCTGCAAA 206597 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || | || || || || | || | || ||||| || | |||||| || || | Sbjct 206596 TATTAATCTCTGTTGATCGGGTGGAATTCCTTCCTTATCTTGAATTTTTGCCTTAAC--A 206539 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || |||| ||| | ||||||||||| ||| ||||| ||||| || | || ||| Sbjct 206538 TTCTCAATCGTATCAGATGACTCGACATCAAGGGTGATGGTTTTTCCGGTTAATGTTTTT 206479 Query 34964 ACAAAGATCTGCAT 34977 || || || ||||| Sbjct 206478 ACGAATATTTGCAT 206465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689850749917