Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5 636 1e-176 seq7 408 3e-108 seq4 147 2e-29 seq9 131 1e-24 seq13 98.7 7e-15 seq8 86.0 5e-11 >seq5 Length=1204002 Score = 636 bits (704), Expect = 1e-176 Identities = 1127/1623 (69%), Gaps = 58/1623 (4%) Strand=Plus/Plus Query 281298 TTTTCTTGTTATCTGCTTCTTC------AAATTCTTTAGCTTCTCTAATCATTCTCTCAA 281351 |||||||||| ||| | ||||| | ||| || ||| || ||| ||| | |||| Sbjct 496046 TTTTCTTGTTCTCTTCATCTTCTGCTTTATATTTTTCAGCATCATTAACCATACGATCAA 496105 Query 281352 TTTGATCTTCAG---AGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGT 281408 ||| |||||| | |||||||| || ||| ||||| ||||||| || |||| Sbjct 496106 TTT---CTTCAGGTGATAATCTTCCTTTATCATTGGTAATGGTAATATGATT----TTGT 496158 Query 281409 TT----GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 281464 || || ||||| ||| | || || || || | |||||||| ||||| | ||| || Sbjct 496159 TTTCCCGTAGATTTTTCAACAGCTGTAACGTTTAATATACCATTAGCATCAATATCGAAA 496218 Query 281465 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 281524 || ||||||||||| || || ||| | |||||||| || || || || | |||| | Sbjct 496219 GTAACTTCAATTTGTGGAACTTTTCTTGGTGCAGGTGGAATACCATCTAAGTGAAATTTA 496278 Query 281525 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 281584 || | ||||||||| || || | || ||| || ||| | | |||||| || Sbjct 496279 CCTAATAAATTATTATCCTTTGTTAGAGCTCTTTCTCCTTCGTATACTTGGATTAAGACA 496338 Query 281585 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGT 281643 | | ||||||||| | ||| || ||||| | | || | || || || || || || Sbjct 496339 CCTGGTTGATTATCAGCATAGGTAGTAAAAATT-TGACTCTTCTTTGCTGGGATAGTGGT 496397 Query 281644 GTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGG 281703 ||||| || || | |||||||||| |||||| |||||||||||||| | || | | Sbjct 496398 ATTTCTTTCTATCAATTTGGTCATAACACCACCTGCTGTTTCTAAACCTAAGGATAATGA 496457 Query 281704 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAAT 281760 | || || | || | | || ||| | | || | |||| || || | || Sbjct 496458 ACATACGTCTAACAGTAATAAATCTTGCACTG---CAGTGGATTGATCACCAGATAATAT 496514 Query 281761 AGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG 281820 ||||||||||| ||| ||||||||||||||||||||||| || || | | | | Sbjct 496515 AGCTGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTGATGGATCTACAAGC 496574 Query 281821 TTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCC 281880 || || ||||| ||||| | | || |||| | || || ||||| | | ||| || Sbjct 496575 TTCCTTTCCATTAAAAAATTCTTTAATAAGTGTTTGTATTTTTGGAATTCTTGTTGAACC 496634 Query 281881 TCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTT 281940 |||||||| |||| ||| || || | ||||||| | | ||| ||| || || Sbjct 496635 TCCAACTAGAACAACTTCGTGTACACTTTTCTTATCCATCATGGCATCTTTTAACACCTT 496694 Query 281941 TTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 282000 ||| || || || | | | || | || ||| | |||||| ||| | ||||| Sbjct 496695 TTCCACTGGGATGAGTGTATCACGGAAATAATCAATACATAATTCTTCAAATCTTGCTCT 496754 Query 282001 AGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 282060 | | | || || |||||||||| ||||| || || ||||||| ||| || || | ||| Sbjct 496755 ACTTACTGTTACGCTATAATCAATACCTTCAAATAAGGAATCAATTTCGATGGTTGCTTG 496814 Query 282061 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 282120 || ||||| |||| || | ||||| | ||||||| || |||| ||||| || || Sbjct 496815 TGTAGAAGAGGATAATGTTCTCTTAGCTCTTTCACATTGAGTTCTTAATCTTCTCAAAGC 496874 Query 282121 TTTTGCTGATTGATTCAAATCTGTTTT-----ATATTTTCTCTTGAAATCTTCAACACAC 282175 | | ||| ||| || | | | |||| || |||||| || |||||||||||||| Sbjct 496875 TCT-GCT-ATTTTTTGATAAGTCTTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAA 496932 Query 282176 CATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 282235 | |||| | | || |||||||||||||| || | | |||| ||| | || ||| Sbjct 496933 AAGTTTACTAATCTGTTGTCAAAATCTTCACCCCCTAGGTGTGTATCTCCAGCAGTTGCT 496992 Query 282236 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCC 282295 | |||| |||| |||||||||| || | |||| ||||||| || || || || Sbjct 496993 TTCACTTCAAAAATACCATCTTCAATAGTTAGTAGAGAAACATCAAATGTACCTCCTCCT 497052 Query 282296 ATATCAAAAATAAGTACATTCATTTCT--TTGTCTTGGTTTTTATCAAGACCATACGCAA 282353 | ||| ||||| | | |||| ||||| || || | || || | | ||||| || | Sbjct 497053 AAATCGAAAATTAAAATATTCTTTTCTCCTTTTCCT--TTCTTGTGTAATCCATATGCTA 497110 Query 282354 AAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTG 282413 ||| || ||||||||||| ||||||||||||| ||||| | ||||||||| |||||| Sbjct 497111 TAGCTGCTGCAGTTGGTTCGTTAATAATTCTCATGACATTCAAACCAGCAATGGTTCCTG 497170 Query 282414 CATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 ||||||| || ||||||||||| ||||| ||||||||||||||||| || ||||| |||| Sbjct 497171 CATCTTTTGTTGCTTGTCTTTGAGAATCATTAAAATATGCAGGAACTGTGATAACTGCAT 497230 Query 282474 CTGTTACTTC-TTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCA 282530 | ||| || |||||| | | ||| |||| || ||| ||||||||| |||| || Sbjct 497231 -TCTTAATTGATTTTCCTAAA-AAG-GCTTCAGCATTTTCTTTCATTTTTTGCAAAACCA 497287 Query 282531 TTGATGAAATTTGTTCTGGAG--AATA-TTGCTTGGATTCATTTTGATATGATACTTCAA 282587 | || ||||||| |||||| |||| || ||| ||| |||||| ||||||| Sbjct 497288 TAGAGGAAATTTCTTCTGGGTGAAATAATTTCTT---TTCTCCTTGATAGCTAACTTCAA 497344 Query 282588 AATATGGTTTATTACCAAC-----ATTAATAACTTTAAATGGCCAATATTTCATATCTGA 282642 ||| || | | |||| ||| | || |||||||||||| ||||||||| Sbjct 497345 TCATTGGCTTTTCATCAACTCCTGATT--TTACAGTAAATGGCCAATGTTTCATATCACT 497402 Query 282643 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 282702 ||| || | || |||| | || |||||||||| |||||||||||||| || || Sbjct 497403 TTGGACTGATGATTCGGTAAATTTCCTTCCAATTAATCTTTTTGCATCAAAAACCGTGTT 497462 Query 282703 GGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 282762 |||||| ||| |||||| ||| || ||||||||||| | ||| || ||||| Sbjct 497463 TTCTGGATTTCTTGCTACTTGATTTTTTGCAGCATCTCCAATTAATCTTTCGGTATCTGT 497522 Query 282763 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 282822 || | ||| || |||||||| || | || ||||||||||| |||||||| || || || Sbjct 497523 GAACGCAACGTACGATGGAGTAGTTCTGTTTCCTTGATCATTTGCAATAATATCTACATT 497582 Query 282823 ACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAAT 282882 ||||| ||||||||||||||| | | || || ||||| |||||||||||||| || Sbjct 497583 TTCATTTCTCCATACACCTACACAGGAATATGTCGTACCTAAGTCAATACCAATAGCGAT 497642 Query 282883 TTT 282885 || Sbjct 497643 GTT 497645 Score = 111 bits (122), Expect = 1e-18 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 86115 TAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACC 86174 ||| || ||||| | |||||||||||||||||| ||||| ||| | | |||| ||||| Sbjct 497097 TAATCCATATGCTATAGCTGCTGCAGTTGGTTCGTTAATAATTCTCATGACATTCAAACC 497156 Query 86175 CGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTAC 86234 ||||| | | | ||| ||||||||||| || | |||||||||||||| || || Sbjct 497157 AGCAATGGTTCCTGCATCTTTTGTTGCTTGTCTTTGAGAATCATTAAAATATGCAGGAAC 497216 Query 86235 AGTAATAACTGCTTTATTAATAGGTTTTTGTAAA 86268 || |||||||| || ||||| | |||| |||| Sbjct 497217 TGTGATAACTGCATTCTTAATTGATTTTCCTAAA 497250 >seq7 Length=1639955 Score = 408 bits (452), Expect = 3e-108 Identities = 1066/1597 (67%), Gaps = 53/1597 (3%) Strand=Plus/Minus Query 281303 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 281362 || |||||| | || |||| | || || || |||||||| | |||||||| || | Sbjct 773530 TTCTTATCTTCATCAGCAAACTTTTCTGCATCATTAATCATTTTTTCAATTTGTTCCTTT 773471 Query 281363 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCA 281422 || |||||||| || ||| ||||| |||||| ||| ||| || |||||| Sbjct 773470 GATAATCTTCCTTTATCATTTGTAATCGTAATACCTTTGCTTTTTCCAGTACCTTTATCT 773411 Query 281423 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 281482 | || |||| | ||||||||| || | |||||| |||||||||| ||| Sbjct 773410 TCTGCTTCTACATGCAAAATACCATTTTTGTCAACTGTAAATGTAACTTCAATTTTAGGA 773351 Query 281483 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 281542 || ||||||||||| ||||| || || ||| | |||| |||||| | ||||||| Sbjct 773350 ACTCCTCTCTGAGCTGGTGGAATTCCAGACAATTCAAATTTTCCCAACAAGTGATTATCT 773291 Query 281543 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAA 281602 || || ||| || ||| || ||||| | ||| || |||| | | |||||||||| | Sbjct 773290 TTTGTTAATGCTCTTTCTCCTTCGAATACTTGAATTAGAACTGCTGGTTGATTATCTTGA 773231 Query 281603 TAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662 || || | |||| | ||||| || ||||| |||||||| | ||||| | Sbjct 773230 TACGTCGAAAATGTTTGCGATTTCTTGGTTGGAATAACAGTGTTTCTTTTAATAAGTTGT 773171 Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||||||||| ||| | ||||| | ||| | || | |||||| ||||| | || || Sbjct 773170 GTCATAATACCTCCAACAGTTTCAATACCTAAAGTTAAAGGAGTTACATCTAACAGCACT 773111 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||| | || ||| ||| | | |||| | ||||| || ||||||||| Sbjct 773110 ACATCTTGTAATTCTTC---------ACCTAATATAATACCGGCTTGTATTGCAGCACCA 773060 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 ||||| ||||||||||||||||||| | | || ||| ||| ||||| ||||| | | Sbjct 773059 TATGCTACAGCTTCATCAGGATTAATACCTCTGTTGGGTTCTTTTCCATTAAAAAATTCT 773000 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 || || |||| | || || ||||||| || || ||||||| ||||||||||| | Sbjct 772999 TTAATAATTTGTTGAATTTTTGGTATACGAGTAGAACCACCAACTAGTACAATTTCAT-C 772941 Query 281903 ACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | | | | || || || | ||| |||||| |||| || ||||| | | Sbjct 772940 AATTTTACTCTTTTCATACTTAGCATCATCTAAAACCTTTTTCACAGGTTCTAATGTTTC 772881 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 ||| || || || | | |||||| ||||| |||||||| | || | | | || | Sbjct 772880 TCTGAATAAATCATCATTTAATTCTTCAAATTTTGCTCTAGTTAATGTTTC-TGAAAAAC 772822 Query 282022 AAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA-AGATAGTGCA 282079 || |||||| | | | |||| ||| || || |||| | || | |||| Sbjct 772821 TATGTCCTTCTACAATATCTTCAATTTCTATTTGAG-TTGAATGGACTACTGATAAATTT 772763 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAA 282138 | ||| ||| ||| | || | |||| | || | | ||||| || || |||| || Sbjct 772762 CTTTTTGCAATTTCTACTTCTTTTCTTAATTTTTGAATTGCTTT--CTTATCTGATCGAA 772705 Query 282139 -ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACGATTATC 282195 ||| | || |||| |||| ||| || || | | || | || | | | ||| Sbjct 772704 GATCGATATTCGTTTTTTTCTTAAAAATTTTAATAAA--ATAATCCATTACTCTCTGATC 772647 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||||||||| ||||| || | ||||| || | || || |||| |||| |||| Sbjct 772646 AAAATCTTCTCCTCCTAAATGTGTATTACCAGCAGTTGCATACACTTCAAAAACACCATT 772587 Query 282256 TTCAAGAGACAA-AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 || | | |||| || || ||||||| || |||||||| | ||| | | | || | Sbjct 772586 ATCGATA-ACAAGAATAGAAACATCAAATGTACCACCACCTAAATCGTATACTAATATAC 772528 Query 282315 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 | ||||| ||| |||||||| | ||||| || ||||||||||| |||||||| | Sbjct 772527 TAGTTTCT---TCT---TTTTTATCTAATCCATATGCCAAAGCAGCAGCTGTTGGTTCGT 772474 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | || || | | || || | ||| ||||| ||||||| ||||| || |||||||||| Sbjct 772473 TTATTATACGTACAATGTTCAAACCTGCAATAGTTCCTGCGTCTTTTGTTGCTTGTCTTT 772414 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | | ||| || |||||||||||||| || | ||| |||| |||| ||| || | | Sbjct 772413 GAGCATCATTGAAATATGCAGGAACTGTTACAACAGCATTCTTTACAGATTTCCCTAAAA 772354 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AA 282553 | | |||| ||| |||||| || ||||| ||| | |||||||| || | || Sbjct 772353 ATGATTGTGCTATTTCTTTCATCTTTTCTAAAACCATAGCACTGATTTGTTCAGGTGCAA 772294 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG-TTTATTACCAACATTAAT 282612 | | | || ||| || ||| ||| | || ||| ||| | || ||| | Sbjct 772293 AAGTAGTCTTTTTGTCTTTTATCTGA-ACTCTTATATTTGGCTTTCCTTCC-TGATTTAC 772236 Query 282613 AACTTTAAATGGCCAATATT--TCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670 | || | |||| |||| | || ||||| | ||| ||| |||| || | ||| Sbjct 772235 TATTTCATATGG-TAATAATGATC-TATCTCTTACAACTTCTTGATCATCGAATTTTCTT 772178 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 |||||||| ||||| |||| || | ||| | ||||| | | || ||||| |||| Sbjct 772177 CCAATTAAACGTTTCACATCGAATACAGTTTGTGTTGGGTGTAATGTAGCTTCTAATTTT 772118 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATATGATGGAGTTGT 282786 ||||| ||||| | | | || |||| | ||| ||||| || |||||||| | Sbjct 772117 GCTGCCTCTCCCA----CTTTCCTTTCTCCATCCACAAAAGAAACGTACGATGGAGTAAT 772062 Query 282787 GCGATTACC---TTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTAC 282843 ||||| || || || ||| |||| ||||||||| | ||||||| | ||||| || Sbjct 772061 ACGATTTCCCAATTCATTATT--CAAT-ATTTCAACTCTTCCATTTTTGAAAACACCAAC 772005 Query 282844 ACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 |||||| | ||||||||||| || || |||||| || Sbjct 772004 ACAACTGTATGTTGTTCCTAAGTCGATTCCAATAACA 771968 Score = 98.7 bits (108), Expect = 7e-15 Identities = 203/302 (67%), Gaps = 15/302 (5%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTTCTAAATACTCCA 86019 ||||||||||||||||| ||||||||||||||| | ||| | | ||| || ||| Sbjct 772648 TCAAAATCTTCTCCTCCTAAATGTGTATTACCAGCAGTTGCATACACTTCAAAAACACCA 772589 Query 86020 TTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACG 86079 || |||| | | |||||||| ||||| ||| | ||||| || || || | || Sbjct 772588 TTATCGATAACAAGAATAGAAACATCAAATGTACCACCACCTAAATCGTATACTAATA-- 772531 Query 86080 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 86139 || ||||| || | |||| | |||| || ||||| | ||| || || Sbjct 772530 ----TACTAGTTTCTT-----CTTTTT----TATCTAATCCATATGCCAAAGCAGCAGCT 772484 Query 86140 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 86199 |||||||| || ||||| | || | ||||| ||||| | | | || ||| Sbjct 772483 GTTGGTTCGTTTATTATACGTACAATGTTCAAACCTGCAATAGTTCCTGCGTCTTTTGTT 772424 Query 86200 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGGT 86259 |||||||| || || ||||| |||||||| || || || | ||| || || || | || | Sbjct 772423 GCTTGTCTTTGAGCATCATTGAAATATGCAGGAACTGTTACAACAGCATTCTTTACAGAT 772364 Query 86260 TT 86261 || Sbjct 772363 TT 772362 >seq4 Length=941946 Score = 147 bits (162), Expect = 2e-29 Identities = 265/383 (69%), Gaps = 12/383 (3%) Strand=Plus/Plus Query 68852 TTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACCAATAAAAATTTTAACT 68911 ||||| | ||||| ||||| ||||| ||||||||||| || || ||||| ||||| | Sbjct 270792 TTGTCTTCCACCATATGTTTTAATCTTTGATAATATGTTGGCCCTATAAATATTTTTGAT 270851 Query 68912 GGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACCCCATTCTTCATAACCA 68971 ||| |||| ||||| |||||||||| | | |||||||| ||| |||||| || Sbjct 270852 TTTAACATTTTCCCATTATGACCATTATACAAAATATCATTACCATATTTTTCATATCCT 270911 Query 68972 GCAGCAACTAATTCATCGTT----AATGGCATTAAGATCAACACTTGTAAATGGTGTTGC 69027 || || | ||| || ||| | | || | || ||| |||||||||||| Sbjct 270912 A----AATTATGTAATCTTTGAGAAATTTCTTGAACAGTAATTTTTGAAAATGGTGTTGC 270967 Query 69028 ATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATTCAATAAGTTGCCC 69087 ||| || | |||||| || ||| || |||||| || |||||||| | || || Sbjct 270968 ATCTCCTTCTGCTCCTTCAATCGCAGCTACTTTTCCAGCTAGACATTCAACCAAATGTCC 271027 Query 69088 AATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGGGAATTAATCCAGA 69147 |||||||||||| || | || || || ||||||||||| |||| |||| Sbjct 271028 AATAGTCATACGAGAAGGAACTGCATGTGGGTTCATAATAATATCAGGAAAAGTTCCATC 271087 Query 69148 TTTACTGAATAACATATCTGCTCGATGAGCTTTGTA--TCCAATGGTACCTTTTTGACCT 69205 | ||||||| ||||||| || | | | | |||| |||||| || ||||||||||| Sbjct 271088 TGAACTGAATGGCATATCTTCT-GTTCTG-TATGTAATTCCAATTGTTCCTTTTTGACCA 271145 Query 69206 GCTCTTGACGAAAATTTATCACC 69228 ||| | |||||||||||| Sbjct 271146 TGTCTACTTGCAAATTTATCACC 271168 >seq9 Length=2239043 Score = 131 bits (144), Expect = 1e-24 Identities = 231/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || |||||||| ||||| || || || || ||| ||| | |||| |||| || Sbjct 1480590 TCGAAATCTTCCCCTCCTAAGGATGTGTTACCATTCGTTGCTTTCACTTCAAAAACACCT 1480531 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 || || ||||| || || |||| || ||||| || | |||| ||| | || Sbjct 1480530 CCTAGAATTTCCAAAATAGAAATATCAAATGTACCACCTCCTAAATCATAAACAG---CA 1480474 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 | | |||| | | | | || || | ||| | || ||||| || ||||||||||| Sbjct 1480473 ATAA---CTTTTCCATCGCTCTTTTCTAATCCAAATGCTAAAGCTGCTGCAGTTGGTTCG 1480417 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 |||||||| | | |||| | |||||||||| |||| |||||||| || ||||| ||| Sbjct 1480416 TTAATAATACGAAGTACATCCAAACCAGCAATTTTTCCAGCATCTTTCGTTGCTTGCCTT 1480357 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 ||||| || || ||||| ||||| ||||||||||| || | ||||| | |||| | | Sbjct 1480356 TGTGAGTCATTGAAATACGCAGGTACAGTAATAACAGCTTGGTGTACTTTTCTTCCTAAA 1480297 Query 282494 TAAGCGCTTGCTGTTTGTTTCAT-TTTACTTAAA 282526 ||| || |||| |||||| ||| || ||| Sbjct 1480296 TAATTTTCAGCAGTTTCTTTCATCTTTTCTAAAA 1480263 Score = 125 bits (138), Expect = 5e-23 Identities = 154/214 (72%), Gaps = 21/214 (10%) Strand=Plus/Minus Query 86038 GAAACATCTAATGTCCCAGCTCCTAAGTCATAAACA---ATTACGTTACCACCAGttttt 86094 |||| ||| ||||| ||| ||||||| ||||||||| || || || ||| | | ||| Sbjct 1480512 GAAATATCAAATGTACCACCTCCTAAATCATAAACAGCAATAACTTTTCCATCGCTCTTT 1480453 Query 86095 ttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATT 86154 | |||| || |||| | |||||||||||||||||| ||||| Sbjct 1480452 T------------------CTAATCCAAATGCTAAAGCTGCTGCAGTTGGTTCGTTAATA 1480411 Query 86155 ATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCG 86214 || ||| ||||| ||||| |||||||| ||| ||| |||||||| || |||| | Sbjct 1480410 ATACGAAGTACATCCAAACCAGCAATTTTTCCAGCATCTTTCGTTGCTTGCCTTTGTGAG 1480351 Query 86215 TCATTAAAATATGCTGGTACAGTAATAACTGCTT 86248 ||||| ||||| || |||||||||||||| |||| Sbjct 1480350 TCATTGAAATACGCAGGTACAGTAATAACAGCTT 1480317 Score = 113 bits (124), Expect = 3e-19 Identities = 382/584 (65%), Gaps = 26/584 (4%) Strand=Plus/Minus Query 281235 TAACTGCTTGTTTAACACTGTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAG 281294 |||||| || | | | ||||| | | | ||||| ||||||||| ||||| | Sbjct 1481542 TAACTGTTTTTCTGA-ACTGTAAATTAACGTTTCTGCTTCATTTTTCGAATCTGTTAGAT 1481484 Query 281295 CTTTTTTCTTGTT-ATCTGCTTCTTCAAATTC--TTTAGCTTCTCTAATCATTCTCTCAA 281351 |||||| ||||| ||| ||| | | |||| || ||||||| || |||| | |||| Sbjct 1481483 TTTTTTT-TTGTTGATC--CTTTTCCCTATTCAATTCAGCTTCTTGAACCATTTTTTCAA 1481427 Query 281352 TTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTG-TTT 281410 ||| |||| || | || | | | | | || ||||| || ||| ||| ||| Sbjct 1481426 TTTCTTCTTTGCTTAAACCACCACTACTTTGA---ATGGTAAT-TTGTTGTTTTTTATTT 1481371 Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || ||| ||| |||| | |||| |||| |||| ||||| | ||| ||||| ||| Sbjct 1481370 GTCATTTTGTCAATAGCAGATATGTTAATAATAGCATTAGCATCAACATCGAATGTAACT 1481311 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 |||||||| || || ||||| | || || || || || | |||| ||| | ||| | Sbjct 1481310 TCAATTTGTGGAACTCCTCTAGGTGCTGGAGGAATTCCAACTAAATCAAAAGATCCTAAC 1481251 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 | || || || | | || || ||| || | |||| || ||| | ||| ||| Sbjct 1481250 ATTTTGTTGTCACATGCCATTTCTCTTTCTCCTTGAAAAACTTTAATACTGACTTGTGTT 1481191 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCT 281649 |||||||| | || | ||| | |||| ||||| || || || ||||||||||| Sbjct 1481190 TGATTATCAGCTGCTGTGGAAAAGA-TCTGTGATTTCTTTGTTGGTATAGTTGTGTTTCT 1481132 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 || ||| | ||||| | || ||||| |||||||| ||| | || | ||| | || Sbjct 1481131 ATTAATCAATTTGGTGAAAACTCCACCTAATGTTTCTATACCTAAGGATAATGGAATTAC 1481072 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 281769 ||| | || | | || || || | || ||| || | | || |||| Sbjct 1481071 ATCTAAGAGCAACAAATCTT----TTATCTCTCCTTTTAAC--------ACACCTCCTTG 1481024 Query 281770 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTT 281813 ||||| ||||| ||||||| |||||||| || || ||| ||| Sbjct 1481023 GATAGCTGCACCTAATGCAACTGCTTCATCTGGGTTTACACTTT 1480980 >seq13 Length=2538962 Score = 98.7 bits (108), Expect = 7e-15 Identities = 936/1501 (62%), Gaps = 67/1501 (4%) Strand=Plus/Plus Query 163026 AAAATTGTTGAACGTCCTCAACATTTATTTATGAGAGTAGCTATTACACTCCATTACAGG 163085 |||||| ||||| | || |||||||| || ||||||||| ||||| | ||||| Sbjct 814229 AAAATTATTGAAAGACCACAACATTTGTTAATGAGAGTATCTATTGGAATCCAT------ 814282 Query 163086 AAAAATGATCTCGACAGGATATTTGAAACTTATAAATATTTATCTAAAGGATATTTTACT 163145 | | ||| | || | | ||||||| ||| | | | || | |||||| || Sbjct 814283 ATTGACGATTTGGAAAAAGCACTTGAAACATATCACTTAATGTCACAGAAATATTTCACA 814342 Query 163146 CACGCAACACCTACATTATTTAATGCTGGTACAACACATGAACAACTTTCAAGTTGTTTT 163205 || ||||| ||||||||||| ||| |||| || || |||| | || |||||| Sbjct 814343 CATGCAACTCCTACATTATTCAATTCTGGAACTCCAAGACCACAAATGTCTTCGTGTTTT 814402 Query 163206 TTATTGGGTATTGGT---GATTCTCTTGAAGAAATCAGTGAATGTTGGAAAGAATGTGCT 163262 ||||| || ||||| | |||| ||| ||| | |||| ||||||| Sbjct 814403 TTATTATCAATGAAATCAGATTCGATAGAAGGAATTTTCGAAACATTGAAACAATGTGCA 814462 Query 163263 TTAATCAGTAAACATGCAGGAGGAATTGGAATACATATGACTAATATTAGAGTTGAAGGA 163322 ||||| || ||| || || || |||||| | || |||| |||| | || Sbjct 814463 TTAATTAGCAAAACAGCTGGTGGTATTGGAGTTGCAGTGCAAGATATAAGAGGTCAAAAT 814522 Query 163323 GCATATATAGCTTCAACACAAGGAGAAGCAGGTGGTTTAAGAGTTTTGACTA----TTTT 163378 ||||||| ||| | ||| | | || ||| | | || ||| | || Sbjct 814523 TCATATATTAGAGGAACGAATGGAATATCCAACGGATTAGTACCTATG-CTAAGAGTATT 814581 Query 163379 CAATGATATTTCAAGATACGCAAATCAAGGTGGT---AAACGACCCGGTTCTTTTGCTAT 163435 |||||||| | | ||||| | | ||||||| || ||| || || ||||||||| | Sbjct 814582 CAATGATACTGCTAGATATGTAGATCAAGGAGGAGGGAAAAGAAAAGGATCTTTTGCTGT 814641 Query 163436 TTTTATTGAACCGTGGCATGGAGACATATTCTTTTTTCTTGATCTCAAGAAAAATACTGG 163495 | |||||||| |||||| ||||| || ||| | ||| | | |||||| ||| Sbjct 814642 ATACATTGAACCATGGCATTCTGACATTTTTGAATTTTTAGATTTAAGAAAAAATCATGG 814701 Query 163496 AGCAGAAACAGAAAGAGCCAGAGATTTATTTTTGGGTTTGATGATTAATGACATTTTCAT 163555 | |||| | |||||| ||||| | || | | | || | || || |||| || Sbjct 814702 AAAAGAAGAATTAAGAGCTCGAGATCTTTTCTATGCTGTGTGGGTTCCAGATCTTTTTAT 814761 Query 163556 GGAAAGAGTTTATAAAGACGATGTTTGGTCATTAATGTGTCCGTCTCAATGTCCTAATCT 163615 | |||||||| | || | | |||| | ||||||||||| | | ||||| | Sbjct 814762 GAAAAGAGTTAAAGAAAATAAAAATTGGACTTTAATGTGTCCAAATGAGTGTCCAGGGTT 814821 Query 163616 TCTCAATAAATACGGAGACGAATTCACCAAAGAATATCTTAAATATGAAAGTGAAGGTAT 163675 | | | || || || ||||| || |||| |||||||| |||| | Sbjct 814822 AAGCGAAACATGGGGTGAAGAATTTGAAAAGTTATATACAAAATATGAG---GAAGAAAA 814878 Query 163676 TTATTTGAAACAAATAAG----AGCTATTGATTTATGGTT--CAAGATTATGGAGTCACA 163729 || | || ||| || ||| ||||||||||| | | |||| ||| || | Sbjct 814879 C-ATGGGGAAAAAAACAGTCTTAGCACAAGATTTATGGTTTGCTATATTACAGAGCCAGA 814937 Query 163730 AATTGAGACAGGAGTTCCGTATGTTATGTTCAAAGATGCGATCAATGACAAATCAAATCA 163789 | || ||||| || || || | | | |||||| || ||| ||||| ||||| Sbjct 814938 TA--GAAACAGGTGTCCCTTACATGCTTTATAAAGATTCGTGTAATTCTAAATCGAATCA 814995 Query 163790 AATTAATATTGGTGTTGTTAATGGTTCAAATTTATGTTGTGAAATTGTGGAAG-----TA 163844 | ||| | || | | || || || ||||||||||| ||| | ||| | Sbjct 814996 GAAAAATTTAGGAACTATAAAATGTAGTAACTTATGTTGTGAGATTATTGAATACACATC 815055 Query 163845 TCC-GACAAAAATAATTTCTCAGTATGTAATTTATCATCAATTTG--TCTGCCGAGATTT 163901 ||| || || || || ||||||||| | |||| || | ||| | |||| Sbjct 815056 TCCTGATGAAG----TTGCT--GTATGTAATCTGGCATCTATAGCATTATGC--AAATTT 815107 Query 163902 GTTAAAATTATTGATGAAGTCCCAACTTTCAATTACCAAAAATTATTCAAGATTAGTCGT 163961 || | || || ||| || || |||| | ||| | | | | |||| Sbjct 815108 GTAGA---TACAGA-GAAAAAAGAATTT--AATTTTAAGAAACTTTACCAAATTACAAAA 815161 Query 163962 ATTCTCACTCGCAATCTCAATAATATTATTGACATTAATTTCTATCCTCTCGATAAAACT 164021 ||| | || || ||| | |||| ||||| || | |||| || || | || || || Sbjct 815162 ATTATTACACGAAATTTGGATAAAATTATAGAAAGAAATTATTACCCAGTTGAAGAAGCT 815221 Query 164022 CGGATTACCAATCTTCGTGATCGTCCTATTGGTATTGGAGTTCAGGGATTGGCTGATGTA 164081 | | ||||| | || | || || || || || ||||| |||||||||||| Sbjct 815222 AGAAGATCCAATACAAGACATAGACCAATAGGAATAGGGGTTCAAGGATTGGCTGATACT 815281 Query 164082 TTTGCCATGTT--TAAGAC-TCCTTTTGATTCGGAAATTGCTCGTGATCTCAATCGTAAA 164138 ||| ||||| ||||| ||| | ||| || || |||| || | ||| | | Sbjct 815282 TTT---ATGTTATTAAGATATCCCTATGAATCAGATTCTGCTAAAGAATTAAATAAAAGA 815338 Query 164139 ATTTTCGAAACAATTTATTATGGAGCTTTAACAGAATCCAATAAACTTGCTAGAGAATTT 164198 ||||| ||||| || ||||||| ||||| | || | || | ||| || | | Sbjct 815339 ATTTTTGAAACTATGTATTATGCTGCTTTGGAAATGTCTATGGAATTGGCTCAAGTGTAT 815398 Query 164199 GGTACATATCAAACTTATCAAGGAAGTCCTATTTCTCAAGGAAAATTCCAATTTGATCTT 164258 || | ||| |||| ||||| || ||||| | |||||||| || |||||||| | Sbjct 815399 GGACCTTATGAAACATATCAGGGTAGTCCAGCTAGTCAAGGAATTTTACAATTTGACATG 815458 Query 164259 TGGAATTTCGA--TAAATCACAATTGAGCGGAATGTGGGATTGGGAACTTTTGCGTCAAG 164316 |||||| | | | || | || | | ||||| |||||| ||||| | | || Sbjct 815459 TGGAATGTAAAGGTTGATAATAAAT-ATTGGAAT-TGGGAT---GAACTAAAGACTAAAA 815513 Query 164317 AAATTTTAAATCATGGTGTTCGTAATAGTCTAGTTACAACCTGTATGCCAACTGCAAGTA 164376 || || ||||| | | ||| || || | |||||||||||| || Sbjct 815514 TAAAG---AAACATGGATTGAGGAATTCATTACTTCTGGCTCCAATGCCAACTGCATCTA 815570 Query 164377 CTTCTCAAATTATGGGATGGAATGAATGTATTGAACCTTATACAGAAAATATTTATTCAA 164436 |||| |||||| ||||| ||||||| ||||||| ||||| || || || | | Sbjct 815571 CTTCGCAAATTCTGGGAAATAATGAATCCTTTGAACCATATACTAGTAACATCTACTACA 815630 Query 164437 GAAGTACTATGGCTGGAGAATATTTTGTGATTAATAAACATCTCATAAAAGATCTTATTG 164496 || || | || |||||||| ||| || ||||| |||||| ||||||||||| ||| Sbjct 815631 GACGTGTTCTGAGTGGAGAATTTTTCGTAGTTAATCCACATCTGCTAAAAGATCTTTTTG 815690 Query 164497 A 164497 | Sbjct 815691 A 815691 >seq8 Length=1849747 Score = 86.0 bits (94), Expect = 5e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 917174 ATTCGTTATAATGATGAGGAAATTTCAAATCGATTCCACCAAAATGAATATCAATACTAT 917233 |||| |||| |||||| |||||| ||||| || |||||| ||| ||||||| | || Sbjct 718131 ATTCATTATCATGATGTGGAAATCGTAAATCTATACCACCACTATGTATATCAAGAACAT 718190 Query 917234 TTCCTAATGTTTTCTTGATCATGGCTGAGCATTCAATATGCCAACCAGGT 917283 |||||||| | || | ||| | ||| |||||||||||||| |||||| Sbjct 718191 TTCCTAATATGTTACTAGCCATTGTTGAACATTCAATATGCCACCCAGGT 718240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740593921839918