Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 8e-15 >seq13 Length=2538962 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | ||||||||||| ||||| | || || || || |||||| | Sbjct 758960 TTTTGTAAAGACTTTAACAGGAAAAACCATCACACTAGACGTTGAGTCATCAGACACAAT 759019 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||| || || ||||| |||||||||||| || ||| |||||| | Sbjct 759020 TGAAAACGTCAAGGCTAAAATACAAGATAAAGAAGGAATTCCACCTGACCAGCAAAGATT 759079 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || || ||||| || || ||||||||||| || || | ||||| || |||| || Sbjct 759080 AATATTTGCAGGAAAACAATTAGAAGATGGAAGAACATTATCAGATTATAATATCCAAAA 759139 Query 206358 AGAGTCTACT 206367 || |||||| Sbjct 759140 GGAATCTACT 759149 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||||||||| ||||| |||| || || || || ||| | ||| || ||| | Sbjct 758749 CAGGAAAAACCATCACACTGGACGTTGAGTCATCAGATACAATTGAAAACGTCAAGGCTA 758808 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 | || ||||| |||||||||||| || ||| |||||| | || || || ||||| | Sbjct 758809 AAATACAAGATAAAGAAGGAATTCCACCTGACCAGCAAAGATTAATATTTGCAGGAAAAC 758868 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 206367 | || ||||||||||| || || | ||||| || |||| || || || ||| Sbjct 758869 AATTAGAAGATGGAAGAACATTATCAGATTATAATATCCAAAAGGAATCAACT 758921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181809549435303