Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq11 138 1e-27 seq13 109 6e-19 >seq11 Length=2227116 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 |||| ||||| ||||| |||||||| ||||| || || | | || | || || || || Sbjct 206667 TGTAAAGTGGACTCCTTCTGAATGTTATAGTCAGCTAATGTTCTGCCA-TCTTCTAGTTG 206609 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| |||||||| || || | ||| |||||||| || || ||||| || ||||||||||| Sbjct 206608 TTTTCCTGCAAATATTAATCTCTGTTGATCGGGTGGAATTCCTTCCTTATCTTGAATTTT 206549 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | || || || | || || || || || || || || || |||||||| ||||| Sbjct 206548 TGCCTTAACATTCTCAATCGTATCAGATGACTCGACATCAAGGGTGATGGTTTTTCCGGT 206489 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||| ||||| ||||| |||||||||||| Sbjct 206488 TAATGTTTTTACGAATATTTGCATTTTG 206461 >seq13 Length=2538962 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 |||| || ||||||||||| || || || || | || | | | | || || | || Sbjct 759154 TGTAAAGTAGATTCCTTTTGGATATTATAATCTGATAATGTTCTTCCA-TCTTCTAATTG 759096 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| |||||||| || || | ||||| || || || || |||||||| ||||| ||||| Sbjct 759095 TTTTCCTGCAAATATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGTATTTT 759036 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | |||||| || || || ||||| || || |||||||| || || Sbjct 759035 AGCCTTGACGTTTTCAATTGTGTCTGATGACTCAACGTCTAGTGTGATGGTTTTTCCTGT 758976 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || || ||||||||||| Sbjct 758975 TAAAGTCTTTACAAAAATTTGCAT 758952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393706112360