Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=1204002 Score = 84.2 bits (92), Expect = 2e-11 Identities = 228/344 (66%), Gaps = 10/344 (3%) Strand=Plus/Minus Query 31231 GCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAA 31290 ||||||| ||| |||| | |||| || ||||| || || || || || |||||| Sbjct 866275 GCAATCATATGTGTGAAAATGGAATAAGAGGCAATGTTAAAGGGAACTCCTAAACCCAAA 866216 Query 31291 TCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAAT 31350 || |||| |||||| | | ||| || | || | | | || |||||||| || Sbjct 866215 TCACAGGATCTTTGATACATAATACATGATAATTTACCATCAAAAACATAAAATTGGCAT 866156 Query 31351 AACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACT 31410 || | ||||||||| || || ||||||| | ||| |||||| || | || Sbjct 866155 AAAATATGACAAGGTGGTAATGCCATTTTATCTAAATCTTTTACATTCCATGCAC--ACA 866098 Query 31411 AACAAA--CGCCGACTGGTTGGATCACGCTTAATCTCTTCTATCACGGCTGTTATTTGAT 31468 || || | || ||| ||||| ||| ||| || || ||||| | ||| ||||| Sbjct 866097 AAATAATTCTCCTACTAGTTGGTTCATTCTTTATTAAATCAATCACATTTTTTAATTGAT 866038 Query 31469 CGATTCCTTCACCCGTATAATTACTAT-CACATCCCTTGTAGGCT--GCACCGAAATGTC 31525 | | ||||| | |||||||| || || || ||||| | ||||| || |||| Sbjct 866037 CAACTCCTTTGTCTTTATAATTATCATGCATAT---TTGTATATTCAGCACCAAAGTGTC 865981 Query 31526 GCCATTGAAACCCATAAATAGGTCCCAGGTCATGTTCTGGTCTA 31569 ||| ||||| ||||||||||| || | |||| | || |||| Sbjct 865980 TCCACTGAAAACCATAAATAGGCCCTAAATCATTTACTTCTCTA 865937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513012835349040