Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=1204002 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||||||||| | ||||| | ||| ||||||||||| || || |||| ||| Sbjct 866278 TGTGCAATCATATGTGTGAAAATGGAATAAGAGGCAATGTTAAAGGGAACTCCTAAACCC 866219 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 | ||| | ||||||||||| | |||||||| |||| | | ||||||||||| Sbjct 866218 AAATCACAGGATCTTTGATACATAATACATGATAATTTACCATCAAAAACATAAAATTGG 866159 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCAT 111935 || | | ||||||||| || |||||||| Sbjct 866158 CATAAAATATGACAAGGTGGTAATGCCAT 866130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391942050810109