Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq13 123 6e-23 >seq13 Length=2538962 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || |||||||| |||||||| | | || ||||||||||| | || || || Sbjct 759149 AGTAGATTCCTTTTGGATATTATAATCTGATAATGTTCTTCCATCTTCTAATTGTTTTCC 759090 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||| || || | | ||| |||||||| |||| |||||| || || || || || || Sbjct 759089 TGCAAATATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGTATTTTAGCCTT 759030 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 |||||||| || ||||| || ||||| || || ||||| || ||||| || | ||| Sbjct 759029 GACGTTTTCAATTGTGTCTGATGACTCAACGTCTAGTGTGATGGTTTTTCCTGTTAAAGT 758970 Query 211097 CTTTACAAACACCTGCAT 211114 ||||||||| | ||||| Sbjct 758969 CTTTACAAAAATTTGCAT 758952 Score = 96.9 bits (106), Expect = 8e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || |||||||| |||||||| | | || ||||||||||| | || || || Sbjct 758921 AGTTGATTCCTTTTGGATATTATAATCTGATAATGTTCTTCCATCTTCTAATTGTTTTCC 758862 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||| || || | | ||| |||||||| |||| |||||| || || || || || || Sbjct 758861 TGCAAATATTAATCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCTTGTATTTTAGCCTT 758802 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 |||||||| || || || || ||||| || || ||||| || ||||| Sbjct 758801 GACGTTTTCAATTGTATCTGATGACTCAACGTCCAGTGTGATGGTTTTTCC 758751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159140965235195