Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq13 183 3e-41 >seq13 Length=2538962 Score = 183 bits (202), Expect = 3e-41 Identities = 358/526 (68%), Gaps = 5/526 (1%) Strand=Plus/Minus Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 |||||| |||||| ||||| |||||||| | |||||||||||||||| ||||| Sbjct 2310282 TAAACAGTTAAAATCTGTGTGTAGTCCTTCATCTCGACTAATCAATTCATTACTGAATGT 2310223 Query 23565 TAATCC-TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAA 23623 ||||| || | | || | | ||||||| ||||||||||||| || ||| || Sbjct 2310222 CAATCCATGTAACTTATTTT-GCTTTTTAAACCAAAATATTGCACAGAAACTTCCACTAA 2310164 Query 23624 AGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAAT 23683 | ||||| || || || ||| ||||| | | | |||| | |||| || Sbjct 2310163 ATAAAATTCCTTCTACGCATGCATTTGCCACTATCCTTTCTGCAAAGGA---ATTAGTAT 2310107 Query 23684 CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTG 23743 || |||||||| || ||| || || ||||||| || |||| || | Sbjct 2310106 CATTTATCCATTTGGCTGCCCATAATGCTTTATTTTTTACAGCTGGTATATTTTCTATAG 2310047 Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTAT 23803 | | || | | | |||||| | ||| |||| || ||||||||| |||||| | Sbjct 2310046 CATGAAATAAATTCAATCTTTCTTTTTCATCCTTTATGTAATTATCAATTAATAAACTGT 2309987 Query 23804 ACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAG 23863 | |||| ||||| |||||||||| ||| || ||||| |||||| | | || || | Sbjct 2309986 ATGTTTCGGAATGTATATTTTCAACAGCTATTTGAAAAGAATAAAATTTTTTTGCCTCTG 2309927 Query 23864 ACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAG 23923 | |||||| | ||||| | ||||||||||||| |||||| |||||||| | Sbjct 2309926 TAATTTGAACTTGTCGTAAAAACTTACTAGCTAAATTTTCCAAAACAATTCCATCACTTG 2309867 Query 23924 CAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCC 23983 | ||||| || || | ||||| |||||||||||| |||||| | |||||||| Sbjct 2309866 CTGCAAAAAATGCTAAAACATGTTTTATAAAATGCTTTTCATTATCATTTAATTTTTCGA 2309807 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 |||| || | ||| | |||||||| | ||| || |||||||||| Sbjct 2309806 AATCTTTTAAATCACTCGATAAATCTATTTCCTCCGCTGTCCAAAA 2309761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521483156680200