Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 1e-13 >seq19 Length=2400328 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| ||||| ||||||||||| || ||||| ||||| |||| | | |||||| Sbjct 232932 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACATCCTCC 232873 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| || || | ||| || || ||||| || || || | |||||||| || | Sbjct 232872 AACTGCTTTCCTGAATATATTAGCCTCTGTTGATCAGGTGGGATTCCTTCCTTATCCTCA 232813 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || ||| ||| || | | | || || | |||| |||| ||| ||||| || Sbjct 232812 ATTTTTGATTTAACATTCCTAATCGTTTCGGATGCCTCCACATCCAGGGTGATGGTTTTT 232753 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||||||| ||||| || |||| |||||||||| Sbjct 232752 CCGGTTAATGTTTTTACGAATACTTGCATTTTG 232720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259055904048