Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq23 105 1e-17 >seq23 Length=1360573 Score = 105 bits (116), Expect = 1e-17 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 70217 ATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTG 70276 |||||| ||||||| | ||||||| | |||||||| |||| || ||||| || Sbjct 1026116 ATGTGC--ATGGAATGTTAAAGATTTGGATCAAATGGCTTTACCTCCTTGTCATATCTTA 1026173 Query 70277 GCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGAC 70336 ||| |||||| | |||||| ||| |||||||| | |||||||| ||| | ||| Sbjct 1026174 TGTCAATTTTACGTTTTCGATGGGAAACTGTCATGCATTATGTATCAAAGGTCTTGTGAC 1026233 Query 70337 ATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCT 70396 |||| || || || ||||| ||||| ||| ||||| || || || ||||||||||| Sbjct 1026234 TTGGGTCTTGGGGTCCCCTTCAACATAGCATCTTATTCCATATTCACACACATGATTGCA 1026293 Query 70397 CA 70398 || Sbjct 1026294 CA 1026295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058940629280