Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq18 113 7e-21 >seq18 Length=2187873 Score = 113 bits (124), Expect = 7e-21 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| |||||||| ||||| ||| | ||| |||| | | ||||| | Sbjct 158800 GAGATAACATTCAAGGTATCACCAAACCAGCCATCAGACGTTTGGCCAGAAGAGGTGGTG 158741 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| |||| || ||| | || ||||| || | | || || || ||||||| Sbjct 158740 TAAAGCGTATCTCCGGTTTGATATACGAAGAAATCAGAGGAGTGTTAAAAGTCTTCCTAG 158681 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | || || | ||| | || || || || ||||| || | ||||||||||| Sbjct 158680 AAAATGTAATTAAAGATTCCATCATGTACACTGAACACGCAAAGAGAAAGACTGTCACTG 158621 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | ||||| || || || | |||||| | ||||| | | | ||||||||||| ||| Sbjct 158620 CTATGGACATTGTGTACTCGTTGAAAAGACAAGGAAGAACCTTATATGGTTTTGGTGGTT 158561 Query 16698 AA 16699 || Sbjct 158560 AA 158559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075174399404