Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq28 89.7 1e-12 seq15 86.0 1e-11 >seq28 Length=1832627 Score = 89.7 bits (98), Expect = 1e-12 Identities = 57/61 (93%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 142059 GTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1230156 GTGGCGCAATTGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCGC 1230215 Query 142118 C 142118 | Sbjct 1230216 C 1230216 >seq15 Length=914168 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 142510 TTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCC 142566 ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| Sbjct 311848 TTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 311904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836431263548