Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq23 414 7e-110 seq25 215 4e-50 seq18 113 3e-19 seq20 87.8 1e-11 >seq23 Length=1360573 Score = 414 bits (458), Expect = 7e-110 Identities = 1071/1598 (67%), Gaps = 62/1598 (4%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 ||| || ||| || | | ||| | ||||||| ||| || |||||||| | || Sbjct 567498 ATTTTTCAGCATCGTTCACCATACGGTCAATTTCTTCTGGGGACAATCTTCCCTTGTCAT 567557 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTTT----GTTGATTTATCAGCGGCAGTCACATTA 517270 | ||||| ||||||| || | || || || || || ||| | ||||| |||||| Sbjct 567558 TCGTAATGGTAATAT----GGTTCTGCTTTCCAGTAGACTTTTCAACAGCAGTGACATTA 567613 Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330 || |||||||||||||| | ||||| || ||||||||||| || || ||| | ||| Sbjct 567614 AGGATACCATTGGCATCAATGTCAAAGGTAACTTCAATTTGTGGAACTTTTCTTGGGGCA 567673 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 |||||||| || || | | |||| | || | | ||||| || || || | || | Sbjct 567674 GGTGGGATACCGTCTAGGTGAAATTTACCTAAAAGGTTATTGTCCTTGGTTAGGGCTCTT 567733 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || ||| | | |||||| ||| | | ||| ||||| | ||| || || || | | Sbjct 567734 TCTCCTTCGTACACTTGGATCAACACTCCTGGTTGGTTATCAGCATAGGTAGTGAAGATT 567793 Query 517451 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 || | || || || || || || ||||| ||||| | |||||||||| || || Sbjct 567794 -TGACTCTTCTTGGCGGGGATCGTGGTATTTCTCTCAATGAGCTTGGTCATAACTCCTCC 567852 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA-CAATA--TTTTGAA- 517565 ||| ||||| |||||||| || | ||||| ||| || ||| || ||| | | ||| | Sbjct 567853 TGCGGTTTCCAAACCAAGGGATA-AGGAGC-ACA-CATCTAAGAGCAACAAGTCTTGTAC 567909 Query 517566 -GTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 | || || || ||| |||| ||| |||||||| | ||||||||||||||||| Sbjct 567910 GGCATTGGATTGGTC--ACCGGACAA-AATGGCTGCTTGCACTGCAGCACCATATGCAAC 567966 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTT--AGTTTT--TTACCATTGAAAAAATT--TGA 517677 ||||||||||| || | || || | || || || || || ||| |||| | | Sbjct 567967 GGCTTCATCAGGGTTGA----TTGATCTGCAGGCTTCCTTTCCGTT-AAAGAATTCCTTA 568021 Query 517678 AAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 517737 | || || | | || ||||| | | || || ||||| | |||| ||| ||||| Sbjct 568022 ATGA-GTGTTTGAATTTTGGGAATTCTTGTGGAACCACCAACAAGAACAACTTCGTGCAC 568080 Query 517738 -CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 || | || |||| ||| ||| || || || ||||| || || | | Sbjct 568081 GCTCTTCTTG-TCCATCATTGCATCTTTCAACACCTTCTCAACAGGGATTAGCGTATCAC 568139 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 517856 || | || ||| | ||| || ||| | ||||| | | || ||| | || || | Sbjct 568140 GGAAGTAATCGATACATAATTCCTCAAATCTGGCTCTGCTTACTGTTACACTGTAGTCGA 568199 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 517916 | ||||| || | ||||||| ||| || || | ||| || || || || | | ||||| Sbjct 568200 TACCTTCAAAGAGGGAATCAATTTCGATGGTGGCTTGTGTGGAGGAGGACAAGGTACGTT 568259 Query 517917 TAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT---GATTCAAAT 517973 | || | ||||| || | || ||||| || ||| | ||| || ||| |||| Sbjct 568260 TGGCTCTCTCACACTGAGTTCGTAATCTTCTCAAAGCTCT-GCTATTTTTGGAT--AAAT 568316 Query 517974 CTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 | || ||| |||||| || |||||||||||||| | | || | | || |||| Sbjct 568317 CCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGTTGACCAATCTGTTGTCAA 568376 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 ||||||| |||||||| | ||| | ||| | ||||| | |||| ||||| |||||||| Sbjct 568377 AATCTTCTCCTCCCAAGTGAGTGTCTCCAGCTGTAGCCTTCACTTCGAAAATTCCATCTT 568436 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || | || | |||||| ||||| || || | ||| || || || | ||| Sbjct 568437 CAATAGTAAGGAGGGATACATCGAAAGTTCCTCCTCCAAGATCGAAGATCAGAATGTTCT 568496 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 |||| | | ||||| | ||||||||| |||| |||||| || ||||| || |||| Sbjct 568497 TTTCACCCTTTCCTTTTTTGTGAAGACCATATGCAATAGCAGCTGCGGTTGGCTCGTTAA 568556 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 | ||||||| |||||| | ||||||||| | ||||| || || |||||||| ||||||| Sbjct 568557 TGATTCTCATAACATTCAAACCAGCAATGGTACCTGCGTCCTTGGTGGCTTGCCTTTGTG 568616 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAG 518330 |||| |||||||| || || || || || || |||| ||| || || | | ||| Sbjct 568617 AATCATTAAAATAAGCTGGGACGGTGATGACTGCATTTTTTATAGACTTTCCTA-AGAAG 568675 Query 518331 CGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG-GAA- 518386 |||| || | | |||||| || |||| ||| || || |||| ||| ||| ||| Sbjct 568676 -GCTTCGGCATTCTCTTTCATCTTTTGCAAAACCATAGAAGAGATTTCTTCGGGGTGAAA 568734 Query 518387 -TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC-----A 518440 ||| ||| || |||||| ||||||| ||||| | | |||| | Sbjct 568735 TAATTTCTT---CTCTCCTTGATAGCTCACTTCAATCATGGGTTTCTCATCAACACCGGA 568791 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 || |||| |||| ||||||| ||||||||| || ||| ||| | || | Sbjct 568792 TT--TAACGGTAAAGGGCCAGTGTTTCATATCGCTCTGCACAGAAGATTCAGTGAACTTC 568849 Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATAT 518560 || |||||||| | || ||||| |||| ||| || ||| || |||| |||| | Sbjct 568850 CTTCCAATTAACCTCTTAGCATCGAAAACAGTGTTTTCTGGGTTCCTTGCCACTTGGTTC 568909 Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 || || |||||||| || || || || || || || | |||||| || ||||| || Sbjct 568910 TTAGCGGCATCTCCGATTAGCCTCTCCGTGTCAGTGAAGGCAACATAGGAGGGAGTGGTT 568969 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 | || || || ||||| ||||| || || || || | ||| |||||| || || || Sbjct 568970 CTGTTTCCCTGGTCATTGGCAATGATATCTACATTTTCGTTTCTCCATACTCCGACGCAG 569029 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 518718 | | || || || | |||||||| || || || || Sbjct 569030 GAATAGGTGGTACCAAGGTCAATACCGATGGCGATGTT 569067 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| ||||||| ||| ||||| ||||| || ||||| ||| | | ||||| ||||| || Sbjct 568522 ACCATATGCAATAGCAGCTGCGGTTGGCTCGTTAATGATTCTCATAACATTCAAACCAGC 568581 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 ||| || | | || || ||||| || |||| ||||||||||| ||||| || || Sbjct 568582 AATGGTACCTGCGTCCTTGGTGGCTTGCCTTTGTGAATCATTAAAATAAGCTGGGACGGT 568641 Query 322363 AATAACTGCTTTATTAATAG 322382 || ||||| || || |||| Sbjct 568642 GATGACTGCATTTTTTATAG 568661 >seq25 Length=1531272 Score = 215 bits (238), Expect = 4e-50 Identities = 827/1268 (65%), Gaps = 57/1268 (4%) Strand=Plus/Minus Query 517136 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 517195 || ||||| | || |||||| || || || |||||||| |||| ||||| || | | Sbjct 713571 TTCTTATCCTCATCCGCAAATTTTTCTGCATCGTTAATCATTTTCTCGATTTGTTCCTTA 713512 Query 517196 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT-TGTTGATTTATC 517254 || | ||||| || ||| ||||| ||||| | ||| ||| | ||| |||||| Sbjct 713511 GACAGCCTTCCTTTATCATTCGTAATTGTAAT-TCCTTTACTTTTTCCTGTACCTTTATC 713453 Query 517255 AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGG 517314 | || || | ||||| ||||| ||| | ||||| |||||||||| || Sbjct 713452 TTCTGCTTCTACGTGGAGAATTCCATTTTTATCTACTGTGAATGTAACTTCAATTTTGGG 713393 Query 517315 GACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATC 517374 ||| |||||||| || |||||||| ||| | | ||| |||| | | || || || Sbjct 713392 GACACCTCTCTGTGCTGGTGGGATTCCTGTGAGTTCGAATTTTCCTAAAAGATGGTTGTC 713333 Query 517375 TTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATC 517431 || || ||| || |||||| || || | |||||| |||| |||| | || || || Sbjct 713332 CTTGGTTAATGCTCTTTCACCTTCAAATACTTGGAT--TAAC-ACAGCTGGTTGGTTGTC 713276 Query 517432 TGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAAT 517491 | || || | ||| | ||||| || || || ||||||||| | ||| | Sbjct 713275 TTGGTAGGTAGAAAAGGTTTGTGATTTCTTCGTGGGGATAACTGTGTTTCTTTTAATGAG 713216 Query 517492 ATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 517551 | ||||| ||||| || | ||||||| || | | || ||||| ||||| | | Sbjct 713215 TTGTGTCATGATACCTCCAACGGTTTCTATTCCTAACGTCAGTGGAGTAACATCTAGCAA 713156 Query 517552 GACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC 517611 ||| | || ||| | || ||| || |||| || |||| | |||||||||||||| Sbjct 713155 GACCACATCTTGTAATTCTTC-TC-------CCAA-AATAATACCAGCTTGAATAGCAGC 713105 Query 517612 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 |||||| || ||||||||||| || || | | | ||| ||| |||||||| ||||| Sbjct 713104 ACCATAGGCTACAGCTTCATCTGGGTTGATACCTCTATTGGGTTCCTTACCATTAAAAAA 713045 Query 517672 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | | | || |||| | || || ||||||| ||||||||| || | ||||| || Sbjct 713044 TTCTTTTATAATTTGTTGAATTTTGGGGATACGAGTTGATCCTCCTACAAGAACAATCTC 712985 Query 517732 ATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 517790 || | | || | || || ||||| ||| || || || | |||||||| ||| Sbjct 712984 AT-CGATTTTGCTCTTTTCATATTTTGCGTCCTCTAGTACCTTCTTTACGGGTTCTAGAG 712926 Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850 ||||||| ||||| | | |||||| || || ||||| || | || | | Sbjct 712925 TTTCTCTAAATAAGTCATCATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTTTC-GGAG 712867 Query 517851 AATCAAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA-AGA-----A 517903 || | | |||||| | | | |||| ||||| |||||||||| || | Sbjct 712866 AAACTGTGTCCTTCTACGATATCCTCAATTTCAA------TTTGAGTCGAGTGAACTACA 712813 Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT 517963 ||||| | || ||| |||| || | || | || | | |||| | || || Sbjct 712812 GATAGGTTTCTCTTTGCAATTTCAACCTCTTTTCTCAACTTTTGGATGGCTCT--CTTAT 712755 Query 517964 -TGAT-TCAAATCTGT-TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 518020 |||| |||||||| | ||| | || | |||| ||| || | | | || | || | Sbjct 712754 CTGATCTCAAATCTATGTTTGTCTTCT-TCTTAAAAATTTTGATAAA--ATAATCCATCA 712698 Query 518021 CGATT--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 | || |||||| ||||| ||||| || | ||||||||||| ||||| || | | Sbjct 712697 CCCTTTGATCAAAGTCTTCTCCTCCTAAGTGAGTATTTCCTGCTGTAGCGTAAACCTCAA 712638 Query 518079 AAAGTCCATCTTCAAGAGACAA-AAGAGTTACATCATGGGTTCCACCACCCATATCAAAA 518137 | | |||| || | |||| || | ||||| ||||| || || | ||| | Sbjct 712637 ACACACCATTGTCGA-TCACAAGAATGGACACATCGAAAGTTCCTCCTCCTAAATCGTAG 712579 Query 518138 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | | | || | || | |||| ||||| || | || || || ||||| || || Sbjct 712578 ACCA--AGATGC---TC-GTCTCTTCTTTTTTGTCCAATCCGTAAGCCAAAGCTGCTGCG 712525 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 ||||| ||||| ||||| | | || || | ||| ||||| |||||||||| || || Sbjct 712524 GTTGGCTCATTTATAATACGTACAATGTTTAAACCTGCAATGGTTCCTGCATCCTTCGTT 712465 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TC 518316 |||||||| |||| || || || || || || ||||||| || || | | ||| | Sbjct 712464 GCTTGTCTCTGTGCGTCATTGAAGTAAGCTGGCACAGTAACGACAGCGTTCTTAACTGGC 712405 Query 518317 TTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 ||| |||| || || || || ||| ||||||||| |||| ||| | ||| Sbjct 712404 TTTCCCAA---AAACGATTGAGCAATTTCTTTCATTTTTTCCAAAACCATGGCACTGATT 712348 Query 518375 TGTTCTGG 518382 |||||||| Sbjct 712347 TGTTCTGG 712340 Score = 89.7 bits (98), Expect = 4e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 || ||||| || | ||||||||| ||||| ||||| || || | || | |||||| Sbjct 712548 AATCCGTAAGCCAAAGCTGCTGCGGTTGGCTCATTTATAATACGTACAATGTTTAAACCT 712489 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 ||||| | | | ||| ||||||||||||||||||||||| || || ||||| ||| Sbjct 712488 GCAATGGTTCCTGCATCCTTCGTTGCTTGTCTCTGTGCGTCATTGAAGTAAGCTGGCACA 712429 Query 322361 GTAATAACTGCTTTATTAATAGGTTTT 322387 |||| || || || |||| || ||| Sbjct 712428 GTAACGACAGCGTTCTTAACTGGCTTT 712402 >seq18 Length=2187873 Score = 113 bits (124), Expect = 3e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||| | || ||||| || || ||||| || |||||||||| | |||| | ||| ||| Sbjct 1437127 CCAAATGCTAAAGCCGCTGCTGTTGGCTCGTTAATAATTCGGAGCACATCCAAACCTGCA 1437068 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| ||||||| || || |||||||| ||||||||||| |||||||| ||||| || || Sbjct 1437067 ATTTTTCCTGCGTCCTTGGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAGGTACTGTG 1437008 Query 518297 ATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACT 518355 ||||| || | ||| ||| || |||| ||| || |||| ||||||||| Sbjct 1437007 ATAACAGCTTGGTGTACTTTCCTTCCCAA-GTAATTTTCAGCTGTTTCTTTCATTTTTTC 1436949 Query 518356 TAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTT 518394 |||| || | ||||| ||||||||||| ||| Sbjct 1436948 CAAAACGCATGCTCCTATTTGACTTGGGGAATATTTCTT 1436910 Score = 105 bits (116), Expect = 5e-17 Identities = 251/376 (67%), Gaps = 14/376 (4%) Strand=Plus/Minus Query 517268 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 517327 |||| ||| | || || || | ||| || |||||||||||||||||||| ||||| | Sbjct 1438027 TTAATAATTGCGTTTGCGTCTACATCGAAGGTGACTTCAATTTGAGGGACTCCTCTAGGT 1437968 Query 517328 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 517387 |||||||| || || | |||| || | ||| | | |||||||| | | || | Sbjct 1437967 GCAGGTGGAATTCCCACTAAATCGAAAGATCCTAACATTTTATTATCGCATGCCATTTCT 1437908 Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 | ||| || | ||| | || |||| | || ||||| || || | || | |||| Sbjct 1437907 CTTTCTCCTTGGAACACTTTGATACTCACCTGTGTTTGGTTGTCAGCTGCGGTGGAAAAT 1437848 Query 517448 ACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 517506 | |||| |||||||| || || || |||||||| | || | ||||| | | || Sbjct 1437847 A-TCTGCGATTTTTTCGTCGGGATGGTGGTGTTTCTGTTGATCAATTTGGTGAAGACTCC 1437789 Query 517507 ACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 517566 ||| ||||||| ||||||||| || ||| | ||||| | || | | || || Sbjct 1437788 TCCTAGCGTTTCTATACCAAGAGATAGGGGAATTACATCTAGTAATAGCAAATCTT---- 1437733 Query 517567 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 || || || ||| || | | || | || ||||| ||||| ||||||| || Sbjct 1437732 TTATTTCTCCTTTT-------AATACT-CCTCCCTGGATAGCTGCACCTAATGCAACTGC 1437681 Query 517627 TTCATCAGGATTAACA 517642 ||||||||| || ||| Sbjct 1437680 TTCATCAGGGTTGACA 1437665 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 322236 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 322295 || |||| || |||| | ||| ||||| ||||| || ||||| ||| || ||||| | Sbjct 1437135 TTTCTAATCCAAATGCTAAAGCCGCTGCTGTTGGCTCGTTAATAATTCGGAGCACATCCA 1437076 Query 322296 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 322355 |||| |||||||| | | || || ||||| || |||| ||||||||||| || | Sbjct 1437075 AACCTGCAATTTTTCCTGCGTCCTTGGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAG 1437016 Query 322356 GTACAGTAATAACTGCTT 322373 |||| || ||||| |||| Sbjct 1437015 GTACTGTGATAACAGCTT 1436998 >seq20 Length=3314971 Score = 87.8 bits (96), Expect = 1e-11 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 870785 ATTACAAAGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATT 870844 |||||||| | | || | ||||||| ||||| ||||||||||| |||||||||||| | Sbjct 1684586 ATTACAAA-AGAGTTTTGGTCGATTTCTCTTCCCCAAATATTGCCAAAGAAATGCATGTA 1684528 Query 870845 GGACATTTAAGATCAACTAT 870864 ||||||||||||||||| || Sbjct 1684527 GGACATTTAAGATCAACCAT 1684508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821010547768