Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 2e-15 >seq19 Length=2400328 Score = 98.7 bits (108), Expect = 2e-15 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| || || | | || |||| || | |||||| ||| Sbjct 232920 GTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACATCCTCCAACTGCTTTCCT 232861 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 | | || || | ||||| || || || || ||||| || || | ||||||| || Sbjct 232860 GAATATATTAGCCTCTGTTGATCAGGTGGGATTCCTTCCTTATCCTCAATTTTTGATTTA 232801 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || ||| ||| || || || ||||| || ||||| | || ||||| || || ||| Sbjct 232800 ACATTCCTAATCGTTTCGGATGCCTCCACATCCAGGGTGATGGTTTTTCCGGTTAATGTT 232741 Query 195124 TTTACGAACACTTGCATTTATGGT 195147 |||||||| |||||||||| |||| Sbjct 232740 TTTACGAATACTTGCATTT-TGGT 232718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481201973476