Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq23 210 2e-48 seq25 170 2e-36 seq27 127 2e-23 seq18 104 2e-16 seq16 91.5 1e-12 >seq23 Length=1360573 Score = 210 bits (232), Expect = 2e-48 Identities = 552/834 (66%), Gaps = 19/834 (2%) Strand=Plus/Minus Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGG 551840 ||||| |||||| |||| | || || ||||||||||| || ||| |||| | Sbjct 568413 GCTACAGCTGGAGACACTCACTTGGGAGGAGAAGATTTTGACAACAGATTGGTCAACTTT 568354 Query 551841 TGTGTTGAAGATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCT 551897 |||||||||||||||||| ||||||| | || ||| |||| | | | || |||| Sbjct 568353 TGTGTTGAAGATTTTAAAAGAAAAAATAGAGGAAAGGATTTATCCAAAAATAGCAGAGCT 568294 Query 551898 CTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAA 551957 | | | || ||||| || || ||||||||||| | | || || || ||| Sbjct 568293 TTGAGAAGATTACGAACTCAGTGTGAGAGAGCCAAACGTACCTTGTCCTCCTCCACACAA 568234 Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGG 552017 |||| || ||| | ||||| | ||||| || || || || | | | | || Sbjct 568233 GCCACCATCGAAATTGATTCCCTCTTTGAAGGTATCGACTACAGTGTAACAGTAAGCAGA 568174 Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077 |||| |||||| || | ||| ||| ||| | | || | || || || | Sbjct 568173 GCCAGATTTGAGGAATTATGTATCGATTACTTCCGTGATACGCTAATCCCTGTTGAGAAG 568114 Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137 || || | |||| ||| ||| || || | || || ||| |||| ||||||||||| Sbjct 568113 GTGTTGAAAGATGCAATGATGGACAAGAAGAGCGTGCACGAAGTTGTTCTTGTTGGTGGT 568054 Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATT 552196 || ||||||||||| ||||||| | | ||||| || ||| || || || || Sbjct 568053 TCCACAAGAATTCCCAAAATTCAAACACTCATTAAGGAATTCTTT-AACGGAAAGGAAGC 567995 Query 552197 ----AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252 | || || | || || ||||| || ||||| |||||||| ||| | ||||||| Sbjct 567994 CTGCAGATCAA----TCAACCCTGATGAAGCCGTTGCATATGGTGCTGCAGTGCAAGCAG 567939 Query 552253 CTATTCTTTCTGGACAAACTGATGAAAAAC--TACAAAATATTGTACTTGTAGATGT-TA 552309 | ||| | || || | | || || | ||||| | | | || ||||||| | Sbjct 567938 CCATTTTGTCCGGTGA--CCAATCCAATGCCGTACAAGACTTGTTGCTCTTAGATGTGTG 567881 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369 ||||| |||| |||||||| ||||| | ||||| ||||||| || || || || |||| Sbjct 567880 CTCCT-TATCCCTTGGTTTGGAAACCGCAGGAGGAGTTATGACCAAGCTCATTGAGAGAA 567822 Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTG 552429 |||| || || || || || || | || |||| ||| | ||||| ||| | | Sbjct 567821 ATACCACGATCCCCGCCAAGAAGAGTCAAATCTTCACTACCTATGCTGATAACCAACCAG 567762 Query 552430 CTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG 552489 || || ||| | | |||||||||||| | || || || ||||| | | | Sbjct 567761 GAGTGTTGATCCAAGTGTACGAAGGAGAAAGAGCCCTAACCAAGGACAATAACCTTTTAG 567702 Query 552490 GTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTA 552549 ||| ||| | |||| ||||| || ||||| || | ||| || ||||||||||||| Sbjct 567701 GTAAATTTCACCTAGACGGTATCCCACCTGCCCCAAGAAAAGTTCCACAAATTGAAGTTA 567642 Query 552550 CTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTA 552603 | || || || ||||||||||| || | ||||| |||||| ||| || |||| Sbjct 567641 CCTTTGACATTGATGCCAATGGTATCCTTAATGTCACTGCTGTTGAAAAGTCTA 567588 Score = 167 bits (184), Expect = 2e-35 Identities = 372/555 (67%), Gaps = 15/555 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| || | || ||||| ||| || || || || ||| ||| | || Sbjct 569061 GCCATCGGTATTGACCTTGGTACCACCTATTCCTGCGTCGGAGTATGGAGAAACGAAAAT 569002 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||||||||| || || |||||||| ||||| || |||||| | ||||| Sbjct 569001 GTAGATATCATTGCCAATGACCAGGGAAACAGAACCACTCCCTCCTATGTTGCCTTCACT 568942 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || || | || ||||| || || | |||| | | || || || Sbjct 568941 GACACGGAGAGGCTAATCGGAGATGCCGCTAAGAACCAAGTGGCAAGGAACCCAGAAAAC 568882 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| |||| |||||||| | ||||||||||| | || | ||| || |||| ||| Sbjct 568881 ACTGTTTTCGATGCTAAGAGGTTAATTGGAAGGAAGTTCACTGAATCTTCTGTGCAGAGC 568822 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAA------TGTTTCTGGAAAACCTTATATT 550285 |||||||| || ||||| || | ||||| |||| || ||||| ||| Sbjct 568821 GATATGAAACACTGGCCCTT---TACCGTTAAATCCGGTGTTGATGAGAAACCCATGATT 568765 Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAAT--TTTCA-CCAGAACAAATTTCATCTATG 550342 |||| | || ||||| | || ||| ||||| || ||| |||| || |||||| Sbjct 568764 GAAGTGAGCTATCAAGGA---GAGAAGAAATTATTTCACCCCGAAGAAATCTCTTCTATG 568708 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 ||||| || |||||| | | ||| || || | || | | | ||||| Sbjct 568707 GTTTTGCAAAAGATGAAAGAGAATGCCGAAGCCTTCTTAGGAAAGTCTATAAAAAATGCA 568648 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || || || || ||||| ||||||||||| |||||| | ||||| || || || || || Sbjct 568647 GTCATCACCGTCCCAGCTTATTTTAATGATTCACAAAGGCAAGCCACCAAGGACGCAGGT 568588 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 |||||||| | |||||| | | || || || || || || || ||||| ||||| Sbjct 568587 ACCATTGCTGGTTTGAATGTTATGAGAATCATTAACGAGCCAACCGCAGCTGCTATTGCA 568528 Query 550523 TATGGACTTGATAAA 550537 ||||| ||| | ||| Sbjct 568527 TATGGTCTTCACAAA 568513 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 361702 AAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCC 361761 ||||||||| || | | ||| || ||||| |||||||| ||| | |||||||| | || Sbjct 568519 AAGACCATATGCAATAGCAGCTGCGGTTGGCTCGTTAATGATTCTCATAACATTCAAACC 568578 Query 361762 CGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAAC 361821 || || | ||| || |||||||| | ||||| |||||||||||| || || || Sbjct 568579 AGCAATGGTACCTGCGTCCTTGGTGGCTTGCCTTTGTGAATCATTAAAATAAGCTGGGAC 568638 Query 361822 AGTAATCACTGCTTTTT 361838 || || ||||| |||| Sbjct 568639 GGTGATGACTGCATTTT 568655 >seq25 Length=1531272 Score = 170 bits (188), Expect = 2e-36 Identities = 379/565 (67%), Gaps = 13/565 (2%) Strand=Plus/Plus Query 552013 CGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAG 552072 |||| ||||| |||||||| | | ||| | |||||| |||| | ||||| ||| Sbjct 712881 CGAGAGCCAAGTTTGAAGAATTGAATGATGACTTATTTAGAGAAACTCTAGAACCCGTA- 712939 Query 552073 AACAAGTTTTAAGAG-ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTT 552131 || ||| | |||| | |||| ||| || |||| | |||| ||||| ||||| Sbjct 712940 AAGAAGGTACTAGAGGACGCAAAATATGAAAAGAGCAAAATCGATGAGATTGTTCTTGTA 712999 Query 552132 GGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAA 552191 || ||||| || | || || ||||||| |||| ||| | ||| |||||||| Sbjct 713000 GGAGGATCAACTCGTATCCCCAAAATTCAACAAATTATAAAAGAATTTTTTAATGGTAAG 713059 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCA 552251 || ||| | || | || |||||||| ||||| ||||||||||| || |||||||| Sbjct 713060 GAACCCAATAGAGGTATCAACCCAGATGAAGCTGTAGCCTATGGTGCTGCTATTCAAGCT 713119 Query 552252 GCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTAC 552310 | |||| ||| ||| ||| || ||||| || | || |||| |||||||||| Sbjct 713120 GGTATTATTTTGGGA---------GAAGAATTACAAGATGTGGT-CTTGCTAGATGTTAC 713169 Query 552311 TCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAA 552370 ||| || | | || ||||||| ||||||||||| ||||| | || || | ||||| Sbjct 713170 TCCACTGACGTTAGGAATAGAAACCGTTGGAGGTATCATGACACAACTCATTAAAAGAAA 713229 Query 552371 TACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGC 552430 || ||| || || ||||| | |||||||| || ||| || ||| | || Sbjct 713230 CACAGTTATCCCCACGAAGAAATCACAAACCTTTTCTACCTACCAAGACAACCAACCAGC 713289 Query 552431 TGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG 552490 ||| ||| ||| | |||||||| |||||| ||| || || || || ||| | || Sbjct 713290 TGTGTTAATCCAAGTATTTGAAGGTGAAAGAGCATTAACCAAGGACAACCATCTTTTAGG 713349 Query 552491 TACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC 552550 | || | | ||| || || || || | | || || || ||||||||||||| Sbjct 713350 AAAATTCGAACTCACAGGAATCCCACCAGCACAGAGAGGTGTCCCCAAAATTGAAGTTAC 713409 Query 552551 TTTCGATATCGATGCCAATGGAATT 552575 ||| | ||| ||||||||| Sbjct 713410 ATTCACAGTAGATAAAAATGGAATT 713434 >seq27 Length=1720986 Score = 127 bits (140), Expect = 2e-23 Identities = 145/191 (76%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||| | | |||||| ||| || | |||||||||||| ||||| Sbjct 553976 TTTGG--ATGTTGTAATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAAT 553919 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| || Sbjct 553918 GAGTCTTTGCTGATCAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTC 553859 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | || ||||| | || || | || || || || || ||||| || | Sbjct 553858 AATCGTGTCGGATGACTCTACATCCAAG-GTGATGGTCTTTCCCGTTAGGGTTTTTACAA 553800 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 553799 AAATTTGCATA 553789 Score = 127 bits (140), Expect = 2e-23 Identities = 145/191 (76%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||| | | |||||| ||| || | |||||||||||| ||||| Sbjct 554432 TTTGG--ATGTTGTAATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAAT 554375 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| || Sbjct 554374 GAGTCTTTGCTGATCAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTC 554315 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | || ||||| | || || | || || || || || ||||| || | Sbjct 554314 AATCGTGTCGGATGACTCTACATCCAAG-GTGATGGTCTTTCCCGTTAGGGTTTTTACAA 554256 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 554255 AAATTTGCATA 554245 Score = 127 bits (140), Expect = 2e-23 Identities = 145/191 (76%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||| | | |||||| ||| || | |||||||||||| ||||| Sbjct 554660 TTTGG--ATGTTGTAATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAAT 554603 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| || Sbjct 554602 GAGTCTTTGCTGATCAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTC 554543 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | || ||||| | || || | || || || || || ||||| || | Sbjct 554542 AATCGTGTCGGATGACTCTACATCCAAG-GTGATGGTCTTTCCCGTTAGGGTTTTTACAA 554484 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 554483 AAATTTGCATA 554473 Score = 123 bits (136), Expect = 2e-22 Identities = 144/191 (75%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||| | | |||||| ||| || | |||||||||||| ||||| Sbjct 553748 TTTGG--ATGTTGTAATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAAT 553691 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| || Sbjct 553690 GAGTCTTTGCTGATCAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTC 553631 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | || ||||| | || || | || || || || || || || || | Sbjct 553630 AATCGTGTCGGATGACTCTACATCCAAG-GTGATGGTCTTTCCCGTTAGGGTCTTCACAA 553572 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 553571 AAATTTGCATA 553561 Score = 114 bits (126), Expect = 1e-19 Identities = 142/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||| | | |||||| ||| || | |||||||||||| ||||| Sbjct 554204 TTTGG--ATGTTGTAATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAAT 554147 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||||||||||||||| ||||| ||||| || || || ||||| |||||| || Sbjct 554146 GAGTCTTTGCTGATCAGGGGGAATACCTTCCTTGTCCTGTATTTTAGCTTTTACATTTTC 554087 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | || ||||| | || || | || || || || || ||||| || | Sbjct 554086 AATCGTGTCGGATGACTCTACATCCAAG-GTGATGGTCTTTCCCGTTAGGGTTTTTACAA 554028 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 554027 AAATTTGCATA 554017 Score = 109 bits (120), Expect = 4e-18 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||| | | |||||| || || | |||||||||||| ||||| Sbjct 554888 TTTGG--ATGTTGTAATCGGACAAGGTTCTTCCGTCCTCTAATTGTTTTCCGGCGAAAAT 554831 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||||||||||||||| ||||| ||||| || || || ||||| |||||| || Sbjct 554830 GAGTCTTTGCTGATCAGGGGGAATACCTTCCTTGTCCTGTATTTTAGCTTTTACATTTTC 554771 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | || ||||| | || || | || || || || || ||||| || | Sbjct 554770 AATCGTGTCGGATGACTCTACATCCAAG-GTGATGGTCTTTCCCGTTAGGGTTTTTACAA 554712 Query 563465 AAATTTGCATA 563475 ||||||||||| Sbjct 554711 AAATTTGCATA 554701 Score = 95.1 bits (104), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || ||||| || | | |||||| || || | |||||||||||| ||||| Sbjct 553520 TTTGG--ATGTTGTAGTCGGACAAGGTTCTTCCGTCCTCTAATTGTTTTCCGGCGAAAAT 553463 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTAC 563399 |||||||||||||| || ||||| |||||||||||||| ||||| |||||| Sbjct 553462 GAGTCTTTGCTGATCGGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTAC 553409 >seq18 Length=2187873 Score = 104 bits (114), Expect = 2e-16 Identities = 188/275 (68%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360 ||||||| | ||| |||||||||||| ||||||| | ||||| | | || || | | Sbjct 1437748 TAGATGTAATTCCCCTATCTCTTGGTATAGAAACGCTAGGAGGAGTCTTCACCAAATTGA 1437807 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 || | ||||| || || || || |||||||| | ||||||| || | || | Sbjct 1437808 TCAACAGAAACACCACCATCCCGACGAAAAAATCGCAGATATTTTCCACCGCAGCTGACA 1437867 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 | ||||| || | || || | || ||||||||||| || | | ||||||| Sbjct 1437868 ACCAAACACAGGTGAGTATCAAAGTGTTCCAAGGAGAAAGAGAAATGGCATGCGATAATA 1437927 Query 552481 ATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAA 552540 | | || |||| |||||| || ||||| ||||| ||| | ||||| || |||| Sbjct 1437928 AAATGTTAGGATCTTTCGATTTAGTGGGAATTCCACCTGCACCTAGAGGAGTCCCTCAAA 1437987 Query 552541 TTGAAGTTACTTTCGATATCGATGCCAATGGAATT 552575 ||||||| || |||||| | || || || | |||| Sbjct 1437988 TTGAAGTCACCTTCGATGTAGACGCAAACGCAATT 1438022 >seq16 Length=1982946 Score = 91.5 bits (100), Expect = 1e-12 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTC-ATTGGCATTTCTTACGGTACC 390869 || |||| || ||||| | | | ||||| ||| | || || | |||||| ||||| | Sbjct 1140324 ATTCCATCCTCCCCATAGAGAAACTGAAT-AATATCTCCATAAGAATTTCTAACGGTTCG 1140382 Query 390870 ATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGT 390929 |||||||| || ||| ||||| | | ||| | |||| | ||||| || ||||| || Sbjct 1140383 ATCATACTGAACCATAACATCTTCCATCGCTTTGATTAATCTCCTTTGTATGTAACCCGT 1140442 Query 390930 GTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAA 390989 || | ||||| || |||| || ||||||||||||||| |||| | || ||||| Sbjct 1140443 TTCCGACGTTTTGCAGGCTGTATCGATGATACCTTCTCTTCCTCCCATGGCATGAAAGAA 1140502 Query 390990 AAATTCCATAGGATTGAGTCCA 391011 | |||| || |||||||| Sbjct 1140503 TACTTCCTGTGGGGTGAGTCCA 1140524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294519233720