Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq24 107 2e-18 >seq24 Length=1435464 Score = 107 bits (118), Expect = 2e-18 Identities = 178/255 (70%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503 |||| || | || |||| || ||||| | || || ||||||||||||| || |||| Sbjct 1241094 TTATGTAGTTGTCTATTAACAAGCTATAGGTCTCCGAATGAATATTTTCAACGGCAATCT 1241035 Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563 | || |||||| | | || || | || ||| || | | ||||| | | |||| Sbjct 1241034 GGAAGGAATAAAATTTCTTTGCCTCCGTTATTTGCACTTGGCGTAAAAATTTGCTCGCTA 1240975 Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623 | ||||| ||||| |||||||| |||||||| || || | |||| |||||| || | Sbjct 1240974 AATTTTCCAACACTATTCCATCACTGGCTGCAAAAAAGGCCAACACATGTTTTATGAAGT 1240915 Query 37624 GTCTTTCATCATTTGA--TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 37681 || |||||| ||| | |||||||| |||| || | ||| | || || |||| ||| Sbjct 1240914 GTTTTTCAT--TTTCATTTAATTTTTCGAAATCTTTTAAATCGCTGGACAAGTCAATTTC 1240857 Query 37682 ATCAACGGTCCAAAA 37696 ||| | ||||| || Sbjct 1240856 CTCAGCTGTCCAGAA 1240842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316592689120