Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq23 405 4e-107 seq25 223 3e-52 seq18 118 8e-21 seq20 87.8 1e-11 >seq23 Length=1360573 Score = 405 bits (448), Expect = 4e-107 Identities = 1068/1598 (67%), Gaps = 62/1598 (4%) Strand=Plus/Plus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 ||| || ||| || | | ||| | ||||||| ||| || |||||||| | || Sbjct 567498 ATTTTTCAGCATCGTTCACCATACGGTCAATTTCTTCTGGGGACAATCTTCCCTTGTCAT 567557 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTTT----GTTGATTTATCAGCGGCAGTCACATTA 281437 | ||||| ||||||| || | || || || || || ||| | ||||| |||||| Sbjct 567558 TCGTAATGGTAATAT----GGTTCTGCTTTCCAGTAGACTTTTCAACAGCAGTGACATTA 567613 Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 || |||||||||||||| | ||||| || ||||||||||| || || ||| | ||| Sbjct 567614 AGGATACCATTGGCATCAATGTCAAAGGTAACTTCAATTTGTGGAACTTTTCTTGGGGCA 567673 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 |||||||| || || | | |||| | || | | ||||| || || || | || | Sbjct 567674 GGTGGGATACCGTCTAGGTGAAATTTACCTAAAAGGTTATTGTCCTTGGTTAGGGCTCTT 567733 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || ||| | | |||||| ||| | | ||| ||||| | ||| || || || | | Sbjct 567734 TCTCCTTCGTACACTTGGATCAACACTCCTGGTTGGTTATCAGCATAGGTAGTGAAGATT 567793 Query 281618 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 || | || || || || || || ||||| ||||| | |||||||||| || || Sbjct 567794 -TGACTCTTCTTGGCGGGGATCGTGGTATTTCTCTCAATGAGCTTGGTCATAACTCCTCC 567852 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA-CAATA--TTTTGAA- 281732 || ||||| |||||||| || | ||||| ||| || ||| || ||| | | ||| | Sbjct 567853 TGCGGTTTCCAAACCAAGGGATA-AGGAGC-ACA-CATCTAAGAGCAACAAGTCTTGTAC 567909 Query 281733 -GTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 | || || || ||| |||| ||| |||||||| | ||||||||||||||||| Sbjct 567910 GGCATTGGATTGGTC--ACCGGACAA-AATGGCTGCTTGCACTGCAGCACCATATGCAAC 567966 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTT--AGTTTT--TTACCATTGAAAAAATT--TGA 281844 ||||||||||| || | || || | || || || || || ||| |||| | | Sbjct 567967 GGCTTCATCAGGGTTGA----TTGATCTGCAGGCTTCCTTTCCGTT-AAAGAATTCCTTA 568021 Query 281845 AAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 281904 | || || | | || ||||| | | || || ||||| | |||| ||| ||||| Sbjct 568022 ATGA-GTGTTTGAATTTTGGGAATTCTTGTGGAACCACCAACAAGAACAACTTCGTGCAC 568080 Query 281905 -CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC 281963 || | || |||| ||| ||| || || || ||||| || || | | | Sbjct 568081 GCTCTTCTTG-TCCATCATTGCATCTTTCAACACCTTCTCAACAGGGATTAGCGTATCAC 568139 Query 281964 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 282023 || | || ||| | ||| || ||| | ||||| | | || ||| | || || | Sbjct 568140 GGAAGTAATCGATACATAATTCCTCAAATCTGGCTCTGCTTACTGTTACACTGTAGTCGA 568199 Query 282024 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 282083 | ||||| || | ||||||| ||| || || | ||| || || || || | | ||||| Sbjct 568200 TACCTTCAAAGAGGGAATCAATTTCGATGGTGGCTTGTGTGGAGGAGGACAAGGTACGTT 568259 Query 282084 TAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT---GATTCAAAT 282140 | || | ||||| || | || ||||| || ||| | ||| || ||| |||| Sbjct 568260 TGGCTCTCTCACACTGAGTTCGTAATCTTCTCAAAGCTCT-GCTATTTTTGGAT--AAAT 568316 Query 282141 CTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 | || ||| |||||| || |||||||||||||| | | || | | || |||| Sbjct 568317 CCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGTTGACCAATCTGTTGTCAA 568376 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 ||||||| |||||||| | ||| | ||| | ||||| | |||| ||||| |||||||| Sbjct 568377 AATCTTCTCCTCCCAAGTGAGTGTCTCCAGCTGTAGCCTTCACTTCGAAAATTCCATCTT 568436 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| || | || | ||||| ||||| || || | ||| || || || | ||| Sbjct 568437 CAATAGTAAGGAGGGATACATCGAAAGTTCCTCCTCCAAGATCGAAGATCAGAATGTTCT 568496 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 |||| | | ||||| | ||||||||| |||| |||||| || ||||| || |||| Sbjct 568497 TTTCACCCTTTCCTTTTTTGTGAAGACCATATGCAATAGCAGCTGCGGTTGGCTCGTTAA 568556 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 | ||||||| |||||| | ||||||||| | ||||| || || |||||||| ||||||| Sbjct 568557 TGATTCTCATAACATTCAAACCAGCAATGGTACCTGCGTCCTTGGTGGCTTGCCTTTGTG 568616 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG 282497 |||| |||||||| || || || || || || |||| | ||| ||||| | | ||| Sbjct 568617 AATCATTAAAATAAGCTGGGACGGTGATGACTGCATTTTTTATAGACTTTCCTA-AGAAG 568675 Query 282498 CGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG---GAGA 282552 |||| || | | |||||| || |||| ||| || || |||| ||| | || | Sbjct 568676 -GCTTCGGCATTCTCTTTCATCTTTTGCAAAACCATAGAAGAGATTTCTTCGGGGTGAAA 568734 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC-----A 282607 ||| ||| || |||||| ||||||| ||||| | | |||| | Sbjct 568735 TAATTTCTT---CTCTCCTTGATAGCTCACTTCAATCATGGGTTTCTCATCAACACCGGA 568791 Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667 || |||| |||| ||||| | ||||||||| || ||| ||| | || | Sbjct 568792 TT--TAACGGTAAAGGGCCAGTGTTTCATATCGCTCTGCACAGAAGATTCAGTGAACTTC 568849 Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727 || |||||||| | || ||||| |||| ||| || ||| || ||| |||| | Sbjct 568850 CTTCCAATTAACCTCTTAGCATCGAAAACAGTGTTTTCTGGGTTCCTTGCCACTTGGTTC 568909 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 || || |||||||| || || || || || || || | |||||| || ||||| || Sbjct 568910 TTAGCGGCATCTCCGATTAGCCTCTCCGTGTCAGTGAAGGCAACATAGGAGGGAGTGGTT 568969 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 | || || || ||||| ||||| || || || || | ||| |||||| || || || Sbjct 568970 CTGTTTCCCTGGTCATTGGCAATGATATCTACATTTTCGTTTCTCCATACTCCGACGCAG 569029 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 282885 | | || || || | |||||||| || || || || Sbjct 569030 GAATAGGTGGTACCAAGGTCAATACCGATGGCGATGTT 569067 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177 ||| ||||||| ||| ||||| ||||| || ||||| ||| | | ||||| ||||| || Sbjct 568522 ACCATATGCAATAGCAGCTGCGGTTGGCTCGTTAATGATTCTCATAACATTCAAACCAGC 568581 Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237 ||| || | | || || ||||| || |||| ||||||||||| ||||| || || Sbjct 568582 AATGGTACCTGCGTCCTTGGTGGCTTGCCTTTGTGAATCATTAAAATAAGCTGGGACGGT 568641 Query 86238 AATAACTGCTTTATTAATAG 86257 || ||||| || || |||| Sbjct 568642 GATGACTGCATTTTTTATAG 568661 >seq25 Length=1531272 Score = 223 bits (246), Expect = 3e-52 Identities = 1036/1605 (65%), Gaps = 77/1605 (5%) Strand=Plus/Minus Query 281303 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 281362 || ||||| | || |||||| || || || |||||||| |||| ||||| || | | Sbjct 713571 TTCTTATCCTCATCCGCAAATTTTTCTGCATCGTTAATCATTTTCTCGATTTGTTCCTTA 713512 Query 281363 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT-TGTTGATTTATC 281421 || | ||||| || ||| ||||| ||||| | ||| ||| | ||| |||||| Sbjct 713511 GACAGCCTTCCTTTATCATTCGTAATTGTAAT-TCCTTTACTTTTTCCTGTACCTTTATC 713453 Query 281422 AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGG 281481 | || || | ||||| ||||| ||| | ||||| |||||||||| || Sbjct 713452 TTCTGCTTCTACGTGGAGAATTCCATTTTTATCTACTGTGAATGTAACTTCAATTTTGGG 713393 Query 281482 GACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATC 281541 ||| |||||||| || |||||||| ||| | | ||| |||| | | || || || Sbjct 713392 GACACCTCTCTGTGCTGGTGGGATTCCTGTGAGTTCGAATTTTCCTAAAAGATGGTTGTC 713333 Query 281542 TTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATC 281598 || || ||| || |||||| || || | |||||| |||| |||| | || || || Sbjct 713332 CTTGGTTAATGCTCTTTCACCTTCAAATACTTGGAT--TAAC-ACAGCTGGTTGGTTGTC 713276 Query 281599 TGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAAT 281658 | || || | ||| | ||||| || || || ||||||||| | ||| | Sbjct 713275 TTGGTAGGTAGAAAAGGTTTGTGATTTCTTCGTGGGGATAACTGTGTTTCTTTTAATGAG 713216 Query 281659 ATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 281718 | ||||| ||||| ||| | ||||||| || | | || ||||| ||||| | | Sbjct 713215 TTGTGTCATGATACCTCCAACGGTTTCTATTCCTAACGTCAGTGGAGTAACATCTAGCAA 713156 Query 281719 GACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC 281778 ||| | || ||| | || ||| || |||| || |||| | |||||||||||||| Sbjct 713155 GACCACATCTTGTAATTCTTC-TC-------CCAA-AATAATACCAGCTTGAATAGCAGC 713105 Query 281779 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 |||||| || ||||||||||| || || | | | ||| ||| |||||||| ||||| Sbjct 713104 ACCATAGGCTACAGCTTCATCTGGGTTGATACCTCTATTGGGTTCCTTACCATTAAAAAA 713045 Query 281839 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 | | | || |||| | || || ||||||| ||||||||| || | ||||| || Sbjct 713044 TTCTTTTATAATTTGTTGAATTTTGGGGATACGAGTTGATCCTCCTACAAGAACAATCTC 712985 Query 281899 ATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 281957 || | | || | || || ||||| ||| || || || | |||||||| ||| Sbjct 712984 AT-CGATTTTGCTCTTTTCATATTTTGCGTCCTCTAGTACCTTCTTTACGGGTTCTAGAG 712926 Query 281958 CAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 282017 ||||||| ||||| | | |||||| || || ||||| || | || | | Sbjct 712925 TTTCTCTAAATAAGTCATCATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTTTC-GGAG 712867 Query 282018 AATCAAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA-AGA-----A 282070 || | | |||||| | | | |||| ||||| |||||||||| || | Sbjct 712866 AAACTGTGTCCTTCTACGATATCCTCAATTTCAA------TTTGAGTCGAGTGAACTACA 712813 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT 282130 ||||| | || ||| |||| || | || | || | | |||| | || || Sbjct 712812 GATAGGTTTCTCTTTGCAATTTCAACCTCTTTTCTCAACTTTTGGATGGCTCT--CTTAT 712755 Query 282131 -TGAT-TCAAATCTGT-TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 282187 |||| |||||||| | ||| | || | |||| ||| || | | | || | || | Sbjct 712754 CTGATCTCAAATCTATGTTTGTCTTCT-TCTTAAAAATTTTGATAAA--ATAATCCATCA 712698 Query 282188 CGATT--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 282245 | || |||||| ||||| ||||| || | ||||||||||| ||||| || | | Sbjct 712697 CCCTTTGATCAAAGTCTTCTCCTCCTAAGTGAGTATTTCCTGCTGTAGCGTAAACCTCAA 712638 Query 282246 AAAGTCCATCTTCAAGAGACAA-AAGAGTAACATCATGGGTTCCACCACCCATATCAAAA 282304 | | |||| || | |||| || | ||||| ||||| || || | ||| | Sbjct 712637 ACACACCATTGTCGA-TCACAAGAATGGACACATCGAAAGTTCCTCCTCCTAAATCGTAG 712579 Query 282305 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 | | | || | || | |||| ||||| || | || || || ||||| || || Sbjct 712578 ACCA--AGATGC---TC-GTCTCTTCTTTTTTGTCCAATCCGTAAGCCAAAGCTGCTGCG 712525 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 ||||| ||||| ||||| | | || || | ||| ||||| |||||||||| || || Sbjct 712524 GTTGGCTCATTTATAATACGTACAATGTTTAAACCTGCAATGGTTCCTGCATCCTTCGTT 712465 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT-TC 282483 |||||||| |||| || || || || || || ||||||| || || | | ||| | Sbjct 712464 GCTTGTCTCTGTGCGTCATTGAAGTAAGCTGGCACAGTAACGACAGCGTTCTTAACTGGC 712405 Query 282484 TTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541 ||| |||| || || || || ||| ||||||||| |||| ||| | ||| Sbjct 712404 TTTCCCAA---AAACGATTGAGCAATTTCTTTCATTTTTTCCAAAACCATGGCACTGATT 712348 Query 282542 TGTTCTGGAGAATATTGCTTGGATTCAT---TTTGATATGATACTTCAAAATATGGTTTA 282598 |||||||| | | | | | | ||| | || || || |||| | || |||||| Sbjct 712347 TGTTCTGGCGCAAA--GGTCGTCTTCTTATCCTTTATTTG-TACTCTTATATTTGGTTTT 712291 Query 282599 TTACCAACATTAATAACTTTAAATGGCCA-ATATTTCATATCTGATTGAACACTT--TGG 282655 | || | || || ||||| | | | ||| ||||| |||| || | || Sbjct 712290 CCTTCCTGGTTTACAATTTCGTATGGCAATAGAGTTC-TATCT--TTGACAACCTCCTGA 712234 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 |||| ||| | ||| || || |||||||| |||| || | || | || || | | Sbjct 712233 TCATCAAATTTTCTTCCTATCAATCGTTTCACATCGAACACTGTCTGTGTGGGGTGTAGG 712174 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT----AAATGAAAC 282771 | |||| |||| ||||| ||||| | | | || |||| || || || || Sbjct 712173 GTGGCTTCCAATTTAGCTGCTTCTCCCA----CTTTCCTTTCTCCGTCCACGAAGGACAC 712118 Query 282772 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 282831 ||| ||||| || | ||||| || || || | || || ||| ||||||||| Sbjct 712117 ATAGGATGGCGTGATACGATTTCCCAACTCGTTGTTTAATATCTCGACTCTACCATTTTT 712058 Query 282832 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 | || || || ||||| |||| || ||||| ||||| || || Sbjct 712057 GAAAACTCCAACGCAACTGTAAGTCGTACCTAAGTCAATTCCGAT 712013 Score = 89.7 bits (98), Expect = 4e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 || ||||| || | ||||||||| ||||| ||||| || || | || | |||||| Sbjct 712548 AATCCGTAAGCCAAAGCTGCTGCGGTTGGCTCATTTATAATACGTACAATGTTTAAACCT 712489 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 ||||| | | | ||| ||||||||||||||||||||||| || || ||||| ||| Sbjct 712488 GCAATGGTTCCTGCATCCTTCGTTGCTTGTCTCTGTGCGTCATTGAAGTAAGCTGGCACA 712429 Query 86236 GTAATAACTGCTTTATTAATAGGTTTT 86262 |||| || || || |||| || ||| Sbjct 712428 GTAACGACAGCGTTCTTAACTGGCTTT 712402 >seq18 Length=2187873 Score = 118 bits (130), Expect = 8e-21 Identities = 223/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 |||||||||||| ||||| | |||||||| ||| || | |||| |||| || Sbjct 1437272 ATCAAAATCTTCTCCTCCTAGGGATGTATTTCCATTCGTCGCCTTAACTTCAAAAACACC 1437213 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | || ||||| | ||| ||| ||| ||||| || | |||| ||| | Sbjct 1437212 TCCCAAAATTTCCAAAATGGAAACGTCAAAGGTACCACCTCCTAAATCATAAACGG---C 1437156 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 | ||| | || | | | | || || | ||| | || ||||| || || ||||| || Sbjct 1437155 A---ATTACCTTTCCGTCGCTCTTTTCTAATCCAAATGCTAAAGCCGCTGCTGTTGGCTC 1437099 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 |||||||||| | |||| | ||| |||||| ||||||| || || |||||||| || Sbjct 1437098 GTTAATAATTCGGAGCACATCCAAACCTGCAATTTTTCCTGCGTCCTTGGTGGCTTGCCT 1437039 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 ||||||||| |||||||| ||||| || || ||||| || | ||||| |||| | Sbjct 1437038 TTGTGAATCATTAAAATAAGCAGGTACTGTGATAACAGCTTGGTGTACTTTCCTTCCCAA 1436979 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||| ||||||| ||||||||| Sbjct 1436978 GTAATTTTCAGCTGTTTCTTTCATTTT 1436952 Score = 104 bits (114), Expect = 2e-16 Identities = 253/377 (67%), Gaps = 16/377 (4%) Strand=Plus/Minus Query 281435 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 281494 |||| ||| | || || || | ||| || |||||||||||||||||||| ||||| | Sbjct 1438027 TTAATAATTGCGTTTGCGTCTACATCGAAGGTGACTTCAATTTGAGGGACTCCTCTAGGT 1437968 Query 281495 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 281554 |||||||| || || | |||| || | ||| | | |||||||| | | || | Sbjct 1437967 GCAGGTGGAATTCCCACTAAATCGAAAGATCCTAACATTTTATTATCGCATGCCATTTCT 1437908 Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 | ||| || | ||| | || |||| | || ||||| || || | || | |||| Sbjct 1437907 CTTTCTCCTTGGAACACTTTGATACTCACCTGTGTTTGGTTGTCAGCTGCGGTGGAAAAT 1437848 Query 281615 ACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673 | |||| |||||||| || || || |||||||| | || | ||||| | | || Sbjct 1437847 A-TCTGCGATTTTTTCGTCGGGATGGTGGTGTTTCTGTTGATCAATTTGGTGAAGACTCC 1437789 Query 281674 ACC-AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA 281732 || ||| ||||||| ||||||||| || ||| | ||||| | || | | || || Sbjct 1437788 TCCTAGC-GTTTCTATACCAAGAGATAGGGGAATTACATCTAGTAATAGCAAATCTT--- 1437733 Query 281733 GTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAG 281792 || || || ||| || | | || | || ||||| ||||| ||||||| | Sbjct 1437732 -TTATTTCTCCTTTT-------AATACT-CCTCCCTGGATAGCTGCACCTAATGCAACTG 1437682 Query 281793 CTTCATCAGGATTAACA 281809 |||||||||| || ||| Sbjct 1437681 CTTCATCAGGGTTGACA 1437665 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 86111 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 86170 || |||| || |||| | ||| ||||| ||||| || ||||| ||| || ||||| | Sbjct 1437135 TTTCTAATCCAAATGCTAAAGCCGCTGCTGTTGGCTCGTTAATAATTCGGAGCACATCCA 1437076 Query 86171 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 86230 |||| |||||||| | | || || ||||| || |||| ||||||||||| || | Sbjct 1437075 AACCTGCAATTTTTCCTGCGTCCTTGGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAG 1437016 Query 86231 GTACAGTAATAACTGCTT 86248 |||| || ||||| |||| Sbjct 1437015 GTACTGTGATAACAGCTT 1436998 >seq20 Length=3314971 Score = 87.8 bits (96), Expect = 1e-11 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 637108 ATTACAAAGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATT 637167 |||||||| | | || | ||||||| ||||| ||||||||||| |||||||||||| | Sbjct 1684586 ATTACAAA-AGAGTTTTGGTCGATTTCTCTTCCCCAAATATTGCCAAAGAAATGCATGTA 1684528 Query 637168 GGACATTTAAGATCAACTAT 637187 ||||||||||||||||| || Sbjct 1684527 GGACATTTAAGATCAACCAT 1684508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629025318328