Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq23 414 3e-110 seq25 217 4e-51 seq27 194 5e-44 seq18 102 2e-16 seq21 96.9 1e-14 >seq23 Length=1360573 Score = 414 bits (458), Expect = 3e-110 Identities = 1027/1547 (66%), Gaps = 19/1547 (1%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 ||| || || || || | ||||| || ||||| || || | || ||| ||| || Sbjct 569062 CGCCATCGGTATTGACCTTGGTACCACCTATTCCTGCGTCGGAGTATGGAGAAACGAAAA 569003 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 |||||| || ||||| ||||| || || |||||||| || || || || ||||| || || Sbjct 569002 TGTAGATATCATTGCCAATGACCAGGGAAACAGAACCACTCCCTCCTATGTTGCCTTCAC 568943 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || || ||| | | || || ||| | || || || |||| || || ||| |||| Sbjct 568942 TGACACGGAGAGGCTAATCGGAGATGCCGCTAAGAACCAAGTGGCAAGGAACCCAGAAAA 568883 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || ||||| ||||||||| | | ||||| || | || |||| ||| || Sbjct 568882 CACTGTTTTCGATGCTAAGAGGTTAATTGGAAGGAAGTTCACTGAATCTTCTGTGCAGAG 568823 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | ||||| | || ||||| ||| | | | ||| ||||| || ||||| Sbjct 568822 CGATATGAAACACTGGCCCTTTACCGTTAAATCCGGTGTTGATGAGAAACCCATGATTGA 568763 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || ||| |||| || | ||| |||| ||||||||||| || || |||||||| Sbjct 568762 AGTGAGCTATCAAGGAGAGAAGAAATTATTTCACCCCGAAGAAATCTCTTCTATGGTTTT 568703 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||||| || | ||| ||||| | ||||| | | ||| |||| || || Sbjct 568702 GCAAAAGATGAAAGAGAATGCCGAAGCCTTCTTAGGAAAGTCTATAAAAAATGCAGTCAT 568643 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || ||||| |||||||||||| | || | || || || || || || | ||| Sbjct 568642 CACCGTCCCAGCTTATTTTAATGATTCACAAAGGCAAGCCACCAAGGACGCAGGTACCAT 568583 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || || |||||| | ||||| ||||| || || || || || || ||||||||||| Sbjct 568582 TGCTGGTTTGAATGTTATGAGAATCATTAACGAGCCAACCGCAGCTGCTATTGCATATGG 568523 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||| | |||| | | ||||| || ||||| || || ||| | || || || || Sbjct 568522 TCTTCACAAAAAAGGAAAGGGTGAAAAGAACATTCTGATCTTCGATCTTGGAGGAGGAAC 568463 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| |||||||| || || || ||||||| |||||||| ||||| || || || ||||| Sbjct 568462 TTTCGATGTATCCCTCCTTACTATTGAAGATGGAATTTTCGAAGTGAAGGCTACAGCTGG 568403 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 || || || | || |||||||||||||| || | | || || |||| |||| Sbjct 568402 AGACACTCACTTGGGAGGAGAAGATTTTGACAACAGATTGGTCAACTTTTGTGTTGAAGA 568343 Query 349918 ATTTAAGCGTCAAGCTA---AAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| | || || || ||| | | ||| ||||| || | | | Sbjct 568342 TTTTAAAAGAAAAAATAGAGGAAAGGATTTATCCAAAAATAGCAGAGCTTTGAGAAGATT 568283 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | ||||| |||||| | || || ||| |||| || || | || ||| || | || || Sbjct 568282 ACGAACTCAGTGTGAGAGAGCCAAACGTACCTTGTCCTCCTCCACACAAGCCACCATCGA 568223 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 ||||||||| || ||| || | || | | | | | | | | || | ||||| Sbjct 568222 AATTGATTCCCTCTTTGAAGGTATCGACTACAGTGTAACAGTAAGCAGAGCCAGATTTGA 568163 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 ||||||||||| ||| || | | || | ||||| || || || || ||||| Sbjct 568162 GGAATTATGTATCGATTACTTCCGTGATACGCTAATCCCTGTTGAGAAGGTGTTGAAAGA 568103 Query 350155 TGCAAAAATGTCCAAAAATCAGATTG-ATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 ||||| ||| ||| || || || | ||||| ||| | ||||||||||| ||| | | Sbjct 568102 TGCAATGATGGACAAGAA-GAGCGTGCACGAAGTTGTTCTTGTTGGTGGTTCCACAAGAA 568044 Query 350214 TTCCAAAAGTTC-AACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272 |||| ||| ||| |||| | | || || || ||||| || || ||| | | |||||| Sbjct 568043 TTCCCAAAATTCAAACACTCATTA-AGGAATTCTTTAACGGAAAGGAAGCCTGCAGATCA 567985 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || |||||||| ||||||||||||||||| || || ||| | ||||| || || Sbjct 567984 ATCAACCCTGATGAAGCCGTTGCATATGGTGCTGCAGTGCAAGCAGCCATTTTGTCCGG- 567926 Query 350333 AATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGT-AACTCCACTTTCGCT 350388 | | || || | | || | || || ||||||| |||| | || || Sbjct 567925 --TGACCAATCCAATGCCGTACAAGACTTGTTGCTCTTAGATGTGTGCTCC-TTATCCCT 567869 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 ||| || ||||| | || | ||| ||||| || ||| ||||||| || | || Sbjct 567868 TGGTTTGGAAACCGCAGGAGGAGTTATGACCAAGCTCATTGAGAGAAATACCACGATCCC 567809 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 | || ||| |||| || |||| | ||| ||||| || |||| || || || Sbjct 567808 CGCCAAGAAGAGTCAAATCTTCACTACCTATGCTGATAACCAACCAGGAGTGTTGATCCA 567749 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 ||| | ||||| ||| | || | || || || ||||| | || ||||| ||| Sbjct 567748 AGTGTACGAAGGAGAAAGAGCCCTAACCAAGGACAATAACCTTTTAGGTAAATTTCACCT 567689 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 | | || ||||| || ||| |||||| || |||||||| | || || ||||| Sbjct 567688 AGACGGTATCCCACCTGCCCCAAGAAAAGTTCCACAAATTGAAGTTACCTTTGACATTGA 567629 Query 350629 TTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGT 350688 | | |||||||| | ||||| || || |||||||| || | ||| |||| || | | Sbjct 567628 TGCCAATGGTATCCTTAATGTCACTGCTGTTGAAAAGTCTACTGG--AAAGCAGAACCAT 567571 Query 350689 AGAA--ATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGA 350733 | | ||||| ||||| || ||| | || |||||| ||||| Sbjct 567570 ATTACCATTACGAATGACAAGGGAAGATTGTCCCCAGAAGAAATTGA 567524 Score = 275 bits (304), Expect = 2e-68 Identities = 703/1052 (67%), Gaps = 25/1052 (2%) Strand=Plus/Plus Query 182753 TTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCT--TTAGCATAC 182810 |||||| | ||| | || ||||| || ||| ||| ||||| ||| || | || Sbjct 567442 TTCAAGGCTGTTTCTTGCTTCAATTCTGTTCTTATTTTCTTCATCCTCTGCTTTGTAT-- 567499 Query 182811 TTTTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGA-AAGATGACCTGCATCATT 182869 ||||||||||| | ||| | || ||||| ||| || || | ||| ||||| Sbjct 567500 TTTTCAGCATCGTTCACCATACGGTCAATTTCTTCTGGGGACAATCTTCCCTTG-TCATT 567558 Query 182870 TGTAAT--TACTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAA 182927 ||||| || || | || || |||||| || ||||||| || | ||||| | Sbjct 567559 CGTAATGGTAATATGGTTCTGCTT--TCCAGTAGACTTTTCAACAGCAGTGACATTAAGG 567616 Query 182928 ATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGT 182987 |||||||| | |||| ||||| | |||||||| |||||||| || ||| ||| Sbjct 567617 ATACCATTGGCATCAATGTCAAAGGTAACTTCAATTTGTGGAACTTTTCTTGGGGCAGGT 567676 Query 182988 GGAATTCCAGTTAAAGT-AAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTC 183046 || || || || | || ||||| |||||| ||||| || || ||| ||||| || Sbjct 567677 GGGATACC-GTCTAGGTGAAATTTACCTAAAAGGTTATTGTCCTTGGTTAGGGCTCTTTC 567735 Query 183047 GCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTG 183106 ||||| || ||||| || ||| |||| || |||||| ||| |||| || | ||| Sbjct 567736 TCCTTCGTACACTTGGATCAACACTCCTGGTTGGTTATCAGCATAGGTAGTGAAGATTTG 567795 Query 183107 CTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGC 183166 | || || || || || | ||||| | || | ||||| ||| ||| || Sbjct 567796 ACTCTTCTTGGCGGGGATCGTGGTATTTCTCTCAATGAGCTTGGTCATAACTCCTCCTGC 567855 Query 183167 AGTTTCTAATCCTAATGATAATGGTGCT-ACATCTAGTAATAATAAATCTGATGTTTTAT 183225 ||||| || || | ||||| || || ||||||| | || || ||| | || Sbjct 567856 GGTTTCCAAACCAAGGGATAA-GGAGCACACATCTAAGAGCAACAAGTCTTGTACGGCAT 567914 Query 183226 CTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCAT 183285 |||| | | ||||| || ||||| || || |||||||||||||| ||||||| Sbjct 567915 TGGATTGGTCACCGGACAAAATGGCTGCTTGCACTGCAGCACCATATGCAACGGCTTCAT 567974 Query 183286 CTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAA 183345 | ||||| ||||| | | ||| || || ||||| ||||| || | | ||||| Sbjct 567975 CAGGGTTGATTGATCTGCAGGCTTCCTTTCCGTTAAAGAATTCCTTAATGAGTGTTTGAA 568034 Query 183346 TTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCAT---CGATATTACTTTTAC 183402 |||| |||||||| || |||||||| || | || ||||| | || | || ||| | | Sbjct 568035 TTTTGGGAATTCTTGTGGAACCACCAACAAGAACAACTTCGTGCACGCTCTT-CTTGTCC 568093 Query 183403 TAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTA 183462 || || |||||| || || || ||||||||| | || | | || |||| | Sbjct 568094 --ATCATTGCATCTTTCAACACCTTCTCAACAGGGATTAGCGTATCACGGAAGTAATCGA 568151 Query 183463 TACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATA 183522 ||||||| || || ||||| ||||| ||| | | | |||| ||||| | | | | Sbjct 568152 TACATAATTCCTCAAATCTGGCTCTGCTTACTGTTACACTGTAGTCGATACCTTCAAAGA 568211 Query 183523 AGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCAC 183582 |||||||||||| || | | |||||| || || || || || | ||| |||| |||| Sbjct 568212 GGGAATCAATTTCGATGGTGGCTTGTGTGGAGGAGGACAAGGTACGTTTGGCTCTCTCAC 568271 Query 183583 ATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATC---TTGTTTATGTT 183639 | |||| || || | || | ||| ||| | | | ||| | | ||| || Sbjct 568272 ACTGAGTTCGTAATCTTCTCAAAGCTCTGCTATTTTTGGATAAATCCTTTCCTCTATTTT 568331 Query 183640 TTCTTTTAAATTCAGTAATA-AAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCT 183698 |||||||||| || || | ||| |||| | ||||| | ||||||||||| || || Sbjct 568332 TTCTTTTAAAATCTTCAACACAAAAGTTG-ACCAATCTGTTGTCAAAATCTTCTCCTCCC 568390 Query 183699 AAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATT 183758 || || || || ||||| ||||| || ||||| || ||||| ||||||||| | | | Sbjct 568391 AAGTGAGTGTCTCCAGCTGTAGCCTTCACTTCGAAAATTCCATCTTCAATAGTAAGGAGG 568450 Query 183759 GATACATCAAATGTACCACCACCCAAATCaaa 183790 |||||||| || || || || || | ||| || Sbjct 568451 GATACATCGAAAGTTCCTCCTCCAAGATCGAA 568482 >seq25 Length=1531272 Score = 217 bits (240), Expect = 4e-51 Identities = 809/1245 (65%), Gaps = 46/1245 (4%) Strand=Plus/Plus Query 349550 ATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGAT 349609 |||||||| | |||||||| ||||||||| || | | ||| || | |||| | | Sbjct 712358 ATGGTTTTGGAAAAAATGAAAGAAATTGCTCAATCGTTTTTGGGAAAGCCAGTTAAGAAC 712417 Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| ||||||| ||||| || || ||||| || ||| | ||||| || ||||| Sbjct 712418 GCTGTCGTTACTGTGCCAGCTTACTTCAATGACGCACAGAGACAAGCAACGAAGGATGCA 712477 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || | |||||| || ||||| || || | || || ||||| || || || ||||| | Sbjct 712478 GGAACCATTGCAGGTTTAAACATTGTACGTATTATAAATGAGCCAACCGCAGCAGCTTTG 712537 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || | || |||| || |||| | | || | | | |||||||| Sbjct 712538 GCTTACGGATTGGACAAAAA-AG-----AAGAGACGAGCATCTTGGTCTACGATTTAGGA 712591 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || ||||| ||||| || | || | || | || | ||||| ||| | || Sbjct 712592 GGAGGAACTTTCGATGTGTCCATTCTTGTGATCGACAATGGTGTGTTTGAGGTTTACGCT 712651 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT--AATCGTC-TCGTTTCGCAT 349906 || || || |||| || | || |||||||| |||||| || || | | || || Sbjct 712652 ACAGCAGGAAATACTCACTTAGGAGGAGAAGACTTTGATCAAAGGGTGATGGATT---AT 712708 Query 349907 TTTGTTAAAGAATTTAAGC----GTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAG 349961 ||| | ||| |||||| | ||| | || | |||| || |||||| |||| Sbjct 712709 TTTATCAAAATTTTTAAGAAGAAGACAAACATAGATTTGAGATC--AGATAAG---AGAG 712763 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | || | | |||| | | |||| ||| ||| | | |||| | || | | | Sbjct 712764 CCATCCAAAAGTTGAGAAAAGAGGTTGAAATTGCAAAGAGAAACCTATC-TGTAGTTCAC 712822 Query 350022 AAACCTCTA-TTGAAATTGATTCTCTTGCTGATGG-CAAAGATTTCTTTTCATCTATTAC 350079 ||| | |||||||||| | | | || || || || ||||| | | | || Sbjct 712823 TCGACTCAAATTGAAATTGAGGATATCGTAGAAGGACACAG-TTTCTCCGAAACCTTGAC 712881 Query 350080 ACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGATCCTGTG 350137 | || |||||||||||| | ||| || | ||||||| ||| | || || || Sbjct 712882 GAGAGCCAAGTTTGAAGAATT--GAATGATGACTTATTTAGAGAAACTCTAGAACCCGTA 712939 Query 350138 GAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT-GATGAAGTAGTTTTAGT 350196 | || ||| || | || |||||| | | ||| | || | | ||||| | ||| | || Sbjct 712940 AAGAAGGTACTAGAGGACGCAAAA-TATGAAAAGAGCAAAATCGATGAGATTGTTCTTGT 712998 Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 || || || || ||||| || ||| ||||||| | || || ||||||||||| || Sbjct 712999 AGGAGGATCAACTCGTATCCCCAAAATTCAACAAATTATAAAAGAATTTTTTAATGGTAA 713058 Query 350257 AGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 ||||| |||| || || |||||||||||||| || |||||||||||| |||| || Sbjct 713059 GGAACCCAATAGAGGTATCAACCCAGATGAAGCTGTAGCCTATGGTGCTGCTATTCAAGC 713118 Query 350317 ATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAAC 350376 || |||| | | | |||| || || || || ||| | |||||||| || Sbjct 713119 TGGTA--TTATTTTGGGAGAAGAATTACAAGAT--GTGGTCT-----TGCTAGATGTTAC 713169 Query 350377 TCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAA 350436 |||||| || | ||| ||||||| ||| | | ||||| || ||| ||||| Sbjct 713170 TCCACTGACGTTAGGAATAGAAACCGTTGGAGGTATCATGACACAACTCATTAAAAGAAA 713229 Query 350437 TAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGC 350496 | | | || || || || || ||||| |||||||| | ||| || || ||||| Sbjct 713230 CACAGTTATCCCCACGAAGAAATCACAAACCTTTTCTACCTACCAAGACAACCAACCAGC 713289 Query 350497 GGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGG 350556 || ||| |||||||||||||||||| | || || || || || || | || Sbjct 713290 TGTGTTAATCCAAGTATTTGAAGGTGAAAGAGCATTAACCAAGGACAACCATCTTTTAGG 713349 Query 350557 AGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTC 350616 | |||| || | | ||| |||||| | ||||| || || | |||||||| | Sbjct 713350 AAAATTCGAACTCACAGGAATCCCACCAGCACAGAGAGGTGTCCCCAAAATTGAAGTTAC 713409 Query 350617 TTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAA 350676 ||| | ||| |||||| ||| | | || |||| || ||| | || || Sbjct 713410 ATTCACAGTAGATAAAAATGGAATTCTCCACGTAGAAGCAGAAGATAAAGGTACAGGAAA 713469 Query 350677 AAGTAGTAAGG--TAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAG 350734 ||||| |||| | |||||| ||||||||| || || || || ||| | || ||| Sbjct 713470 AAGTA--AAGGAATTACAATTACGAATGATAAAGGAAGGCTGTCTAAGGAACAAATCGAG 713527 Query 350735 AAAATGACACAAGATGCCGAATCATATGCTAAGGAAGATGAAGAA 350779 ||||||| | ||||| ||| || ||| | || ||| ||||| Sbjct 713528 AAAATGATTAACGATGCAGAAAAATTTGCGGATGAGGAT-AAGAA 713571 Score = 143 bits (158), Expect = 8e-29 Identities = 487/746 (65%), Gaps = 21/746 (3%) Strand=Plus/Minus Query 182754 TCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGCATACTTT 182813 ||||| || ||||| || || | || || | | || ||| || | ||| | ||| Sbjct 713607 TCAAGGTTGTTTTTTGCTTCGACTTTTTCTCGGAGGTTCTTATCCTCATCCGCAAATTTT 713548 Query 182814 TCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGTA 182873 || ||||| | ||||| | || |||| || ||||| || ||| |||||| ||| Sbjct 713547 TCTGCATCGTTAATCATTTTCTCGATTTGTTCCTTAGACAGCCTTCCTTTATCATTCGTA 713488 Query 182874 ATTACTACATTACT--AGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATAC 182931 ||| || ||| || | || ||| || ||| || ||| || | | ||| | Sbjct 713487 ATTG-TA-ATTCCTTTACTTTTTCCTGTACCTTTATCTTCTGCTTCTACGTGGAGAATTC 713430 Query 182932 CATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAA 182991 |||| || || |||| |||||||| | || ||||||| | |||||| | Sbjct 713429 CATTTTTATCTACTGTGAATGTAACTTCAATTTTGGGGACACCTCTCTGTGCTGGTGGGA 713370 Query 182992 TTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTT 183051 |||| || | |||| ||||| || || || || ||| |||||| || |||| Sbjct 713369 TTCCTGTGAGTTCGAATTTTCCTAAAAGATGGTTGTCCTTGGTTAATGCTCTTTCACCTT 713310 Query 183052 CATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTT 183111 || ||||||| || || ||||| || || || || |||||||| ||| || Sbjct 713309 CAAATACTTGGATTAACACAGCTGGTTGGTTGTCTTGGTAGGTAGAAAAGGTTTGTGATT 713250 Query 183112 TATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTT 183171 | || | || ||| || |||| || | | ||||| | ||| | |||| Sbjct 713249 TCTTCGTGGGGATAACTGTGTTTCTTTTAATGAGTTGTGTCATGATACCTCCAACGGTTT 713190 Query 183172 CTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATT 183231 ||| |||||| | | ||| | |||||||| || | | |||| ||| | ||| Sbjct 713189 CTATTCCTAACGTCAGTGGAGTAACATCTAGCAAGACCACATCT--TGTAAT-TCT---- 713137 Query 183232 TAATATCACTTAA-AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGG 183290 | || | || ||| ||||||||| ||| |||||||| || ||||||||||||||| Sbjct 713136 ---TCTCCCAAAATAATACCAGCTTGAATAGCAGCACCATAGGCTACAGCTTCATCTGGG 713080 Query 183291 TTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTT 183350 || || | | ||| || ||||||||||||||| | |||||||||||||| Sbjct 713079 TTGATACCTCTATTGGGTTCCTTACCATTAAAAAATTCTTTTATAATTTGTTGAATTTTG 713020 Query 183351 GGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACT-TTTACTAATTTG 183409 || || | |||||| || || || | || | |||||||| || || ||| | |||| Sbjct 713019 GGGATACGAGTTGATCCTCCTACAAGAACAATCTCATCGATTTTGCTCTTTTCATATTT- 712961 Query 183410 TGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACAT-- 183467 || || | || || || | || || || | ||||| ||||||||| || || ||| Sbjct 712960 TGCGTCCTCTAGTACCTTCTTTACGGGTTCTAGAGTTTCTCTAAATAAGTC-AT-CATTC 712903 Query 183468 AACTCTTCTAATCTTGCTCTAGTTAA 183493 || ||||| || | ||||| || || Sbjct 712902 AATTCTTCAAACTTGGCTCTCGTCAA 712877 Score = 89.7 bits (98), Expect = 2e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 396505 AGTAAATATAACTGTTTTAGTAGGCATATTAATACCAACTGCAAAGGTTTCTGTTGCAAA 396564 |||||| | ||| | ||| | |||||| ||||| || | ||||||||||| || ||||| Sbjct 408981 AGTAAAAACAACAGATTTGGCAGGCATGTTAATTCCCATGGCAAAGGTTTCAGTCGCAAA 408922 Query 396565 TAGTAATTTAATATAACGTTTTTCAAATAGGAGTTCAACCATTTCTCGTAAAATAGGCAT 396624 | || |||||| | | ||| ||| |||| ||| || |||||| || ||||| | Sbjct 408921 CAATATTTTAATTAACCCTTTGGAAAAAAGGATTTCCACAATTTCTTTCAATATAGGTAG 408862 Query 396625 TATACCTGCATGATGAATTGCAATTCCtttttttAATAA 396663 || || ||||| ||| |||| ||||||| || ||| Sbjct 408861 TAACCCACTGTGATGTATTCCAATCCCTTTTTCTAGTAA 408823 >seq27 Length=1720986 Score = 194 bits (214), Expect = 5e-44 Identities = 184/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | ||| | || || |||||||| || || | Sbjct 554024 TTTGCATACCACCTCGTAAACGTAAGACTAAATGTAAGGTGGATTCTTTTTGGATGTTGT 553965 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || |||| ||||| || | ||||||||| || || || || | |||||||| Sbjct 553964 AATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 553905 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||||||||| || ||||||||||||||||| ||||||| || |||| Sbjct 553904 CAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 553845 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| |||||||||||||| ||||| Sbjct 553844 ACTCTACATCCAAGGTGATGGTCTTTCCCGTTAGGGTTTTTACAAAAATTTGCAT 553790 Score = 194 bits (214), Expect = 5e-44 Identities = 184/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | ||| | || || |||||||| || || | Sbjct 554480 TTTGCATACCACCTCGTAAACGTAAGACTAAATGTAAGGTGGATTCTTTTTGGATGTTGT 554421 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || |||| ||||| || | ||||||||| || || || || | |||||||| Sbjct 554420 AATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 554361 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||||||||| || ||||||||||||||||| ||||||| || |||| Sbjct 554360 CAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 554301 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| |||||||||||||| ||||| Sbjct 554300 ACTCTACATCCAAGGTGATGGTCTTTCCCGTTAGGGTTTTTACAAAAATTTGCAT 554246 Score = 194 bits (214), Expect = 5e-44 Identities = 184/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | ||| | || || |||||||| || || | Sbjct 554708 TTTGCATACCACCTCGTAAACGTAAGACTAAATGTAAGGTGGATTCTTTTTGGATGTTGT 554649 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || |||| ||||| || | ||||||||| || || || || | |||||||| Sbjct 554648 AATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 554589 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||||||||| || ||||||||||||||||| ||||||| || |||| Sbjct 554588 CAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 554529 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| |||||||||||||| ||||| Sbjct 554528 ACTCTACATCCAAGGTGATGGTCTTTCCCGTTAGGGTTTTTACAAAAATTTGCAT 554474 Score = 190 bits (210), Expect = 6e-43 Identities = 183/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | ||| | || || |||||||| || || | Sbjct 554252 TTTGCATACCACCTCGTAAACGTAAGACTAAATGTAAGGTGGATTCTTTTTGGATGTTGT 554193 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || |||| ||||| || | ||||||||| || || || || | |||||||| Sbjct 554192 AATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 554133 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||| || ||||| ||||||||||||||||| ||||||| || |||| Sbjct 554132 CAGGGGGAATACCTTCCTTGTCCTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 554073 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| |||||||||||||| ||||| Sbjct 554072 ACTCTACATCCAAGGTGATGGTCTTTCCCGTTAGGGTTTTTACAAAAATTTGCAT 554018 Score = 185 bits (204), Expect = 3e-41 Identities = 182/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | ||| | || || |||||||| || || | Sbjct 553796 TTTGCATACCACCTCGTAAACGTAAGACTAAATGTAAGGTGGATTCTTTTTGGATGTTGT 553737 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || |||| ||||| || | ||||||||| || || || || | |||||||| Sbjct 553736 AATCGGACAAGGTTCTTCCATCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 553677 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||||||||| || ||||||||||||||||| ||||||| || |||| Sbjct 553676 CAGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 553617 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| || || |||||||| ||||| Sbjct 553616 ACTCTACATCCAAGGTGATGGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCAT 553562 Score = 174 bits (192), Expect = 5e-38 Identities = 181/235 (77%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| | |||||| ||||| | || || |||| ||| || || || ||||| || || | Sbjct 554935 TTAAAAACCACCTCGTAAACGTAAGACCAAGTGTAAG-GTGGATTCCTTTTGGATGTTGT 554877 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || |||| || || || | ||||||||| || || || || | |||||||| Sbjct 554876 AATCGGACAAGGTTCTTCCGTCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 554817 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||| || ||||| ||||||||||||||||| ||||||| || |||| Sbjct 554816 CAGGGGGAATACCTTCCTTGTCCTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 554757 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| |||||||||||||| ||||| Sbjct 554756 ACTCTACATCCAAGGTGATGGTCTTTCCCGTTAGGGTTTTTACAAAAATTTGCAT 554702 Score = 136 bits (150), Expect = 1e-26 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | || | || || || ||||| || || | Sbjct 553568 TTTGCATACCACCTCGTAAACGTAAGACTAAGTGTAAGGTGGATTCCTTTTGGATGTTGT 553509 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || |||| || || || | ||||||||| || || || || | |||||||| Sbjct 553508 AGTCGGACAAGGTTCTTCCGTCCTCTAATTGTTTTCCGGCGAAAATGAGTCTTTGCTGAT 553449 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| ||||||||||| || ||||||||||||||||| ||||||| || |||| Sbjct 553448 CGGGGGGAATACCTTCTTTATCTTGTATTTTAGCTTTTACATTTTCAATCGTGTCGGATG 553389 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCC 140710 || || || | || | |||||||| Sbjct 553388 ACTCTACATCCAAGGTGATGGTCTTTCC 553361 Score = 96.9 bits (106), Expect = 1e-14 Identities = 219/323 (68%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAA-TAATACCATTAGA 206507 ||||| | ||||| |||||| | |||||| || | ||||| || | |||| || || || Sbjct 631395 TGGTCTACATATCTAGCTGTATCATTAAACACTCTCAGCATTGGTACTAAT-CCGTTGGA 631337 Query 206508 AGTTCCATTTGTTCCTCTAA--TATGACTGCCAGTCCCTCTAATATTATGTATATGTAAT 206565 ||||||| |||||||||| || || | || |||||||||| |||| || | Sbjct 631336 TATTCCATTCGTTCCTCTAATGTAAGAAT-TTTGT-CCTCTAATATCCTGTACTGCTACT 631279 Query 206566 CCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCA 206625 ||||| || || || ||| ||| || || | ||||| || | |||| || Sbjct 631278 CCAATACCACCAGCTGTTTTGCTAATCAGGGCGCACTGTTTTAGAGTCTCGAAAATGCCT 631219 Query 206626 TCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTT 206685 |||| ||| || ||| || | |||||| ||| | ||| |||| ||| || Sbjct 631218 TCAATCGAATCTGATTTCATGCAAAGGAGAAAACATGAAGACATTTGGGGTCTTGGTGTG 631159 Query 206686 CCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAA 206745 |||| ||| || || ||||| || || || |||||||| || |||||||| | || || Sbjct 631158 CCAGAATTGAACAAGGTAGGTGTTGCGTGCGTAAAATACTTCTGAGACATCAGATGGTAC 631099 Query 206746 GTAGTTTTCACTTTTTCTAAATC 206768 || | | ||||||| | ||| Sbjct 631098 GTCTCTAACGCTTTTTCCAGATC 631076 >seq18 Length=2187873 Score = 102 bits (112), Expect = 2e-16 Identities = 225/336 (67%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||||| | |||||||| |||| |||||| || || || | |||| | ||| Sbjct 1436943 GTTTTGGAAAAAATGAAAGAAACAGCTGAAAATTACTTGGGAAGGAAAGTACACCAAGCT 1437002 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||||| || ||||| || |||||||||||| | || | || || || || || || Sbjct 1437003 GTTATCACAGTACCTGCTTATTTTAATGATTCACAAAGGCAAGCCACCAAGGACGCAGGA 1437062 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 | ||||| || || |||| || |||| ||||| || || || || || || | ||| Sbjct 1437063 AAAATTGCAGGTTTGGATGTGCTCCGAATTATTAACGAGCCAACAGCAGCGGCTTTAGCA 1437122 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 | ||| | | ||| ||| ||| | ||| ||| ||| ||||||||| ||| Sbjct 1437123 TTTGGATTAG---AAAAGAGCGAC---GGAAAGGTAATTGCCGTTTATGATTTAGGAGGT 1437176 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| ||||| || || | | | || | || ||||||||||||| || || Sbjct 1437177 GGTACCTTTGACGTTTCCATTTTGGAAATTTTGGGAGGTGTTTTTGAAGTTAAGGCGACG 1437236 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 ||| ||||| || || ||||||||||||||| Sbjct 1437237 AATGGAAATACATCCCTAGGAGGAGAAGATTTTGAT 1437272 Score = 84.2 bits (92), Expect = 7e-11 Identities = 115/156 (74%), Gaps = 5/156 (3%) Strand=Plus/Minus Query 183639 TTTCTT-TTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACC 183697 |||||| |||||||| | ||||||| || | || ||| |||||||||||| || || Sbjct 1437314 TTTCTTCTTAAATTCTGCTATAAAATATTCTAATATTCTCTGATCAAAATCTTCTCCTCC 1437255 Query 183698 TAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTT--AAA 183755 || ||||| ||| || || ||||||||||| | || || ||| |||| ||| Sbjct 1437254 TAGGGATGTATTTCCATTCGTCGCCTTAACTTCAAAAACACC-TC-CCAAAATTTCCAAA 1437197 Query 183756 ATTGATACATCAAATGTACCACCACCCAAATCaaaa 183791 || || || ||||| |||||||| || |||||| || Sbjct 1437196 ATGGAAACGTCAAAGGTACCACCTCCTAAATCATAA 1437161 >seq21 Length=1079809 Score = 96.9 bits (106), Expect = 1e-14 Identities = 60/63 (95%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 423966 TCCGTTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAATGTCACTGGTTCGATCC 424025 ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 64338 TCCGT-AGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAAGGTCGCTGGTTCGATCC 64396 Query 424026 CAG 424028 ||| Sbjct 64397 CAG 64399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253856402484