Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq24 104 2e-17 >seq24 Length=1435464 Score = 104 bits (114), Expect = 2e-17 Identities = 177/255 (69%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||| || | || |||| || ||||| | || |||||||||||||||| ||||||| Sbjct 1241094 TTATGTAGTTGTCTATTAACAAGCTATAGGTCTCCGAATGAATATTTTCAACGGCAATCT 1241035 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 | || |||||| | || || | | ||| || | |||||| | | |||| Sbjct 1241034 GGAAGGAATAAAATTTCTTTGCCTCCGTTATTTGCACTTGGCGTAAAAATTTGCTCGCTA 1240975 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 ||||||| || || |||||||| || ||||| || || | |||| |||||| || | Sbjct 1240974 AATTTTCCAACACTATTCCATCACTGGCTGCAAAAAAGGCCAACACATGTTTTATGAAGT 1240915 Query 23957 GTCTTTCATCAGTTGA--TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 24014 || |||||| || | |||||||| |||| || | ||| | || || |||| ||| Sbjct 1240914 GTTTTTCAT--TTTCATTTAATTTTTCGAAATCTTTTAAATCGCTGGACAAGTCAATTTC 1240857 Query 24015 ATCAACTGTCCAAAA 24029 ||| ||||||| || Sbjct 1240856 CTCAGCTGTCCAGAA 1240842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487817479200