Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1821 123 2e-23 >seq1821 Length=1654 Score = 123 bits (136), Expect = 2e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| |||||||||||||| || ||||| || |||||||| ||||||||||| Sbjct 380 CCACCTCTTAATCTTAAAACTAAGTGTAGGGTTGACTCTTTTTGAATGTTGTAATCCGAC 439 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | |||||||||||||| || || |||| || | ||||| || |||| Sbjct 440 AATGTTCTTCCATCTTCTAATTGTTTTCCCGCAAATATTAATCTCTGTTGATCAGGTGGA 499 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTAC 15315 |||||||| ||||| ||||| ||| ||| | || || ||||| | || ||| || Sbjct 500 ATTCCTTCCTTGTCTTGTATTTTAGCCTTAACATTCTCAATAGTATC-CGATGGTTCAAC 558 Query 15316 ATCTAAGGTAATGGTTTTACCT 15337 ||| | || || ||||| ||| Sbjct 559 ATCAAGAGTTATAGTTTTTCCT 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362147109791070