Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3534 109 9e-20 >seq3534 Length=3338 Score = 109 bits (120), Expect = 9e-20 Identities = 172/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 ||||||| || ||||| || ||||| |||||||| || ||| | || | | || || | Sbjct 267 GAGATAATATTCAAGGTATTACCAAACCAGCTATTCGACGTTTAGCAAGAAGAGGAGGTG 326 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||| ||| |||| || || | |||||||| || | | || |||||| | ||| | Sbjct 327 TCAAACGTATCTCCGGTTTAATATATGAAGAAATAAGAGGAGTATTGAAGGTATTCTTAG 386 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||| | | ||||| || ||||| || | ||||| || || Sbjct 387 AGAATGTAATAAAAGATTCAATTATGTATACTGAACACGCAAAGAGAAAGACCGTAACTG 446 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAGT 16696 | |||||||| || || || ||||| | ||||| | || ||| |||||||||||| || Sbjct 447 CTATGGATATTGTTTACTCACTGAAAAGACAAGGAAG-AACATTATATGGTTTTGGAGGT 505 Query 16697 TAAT 16700 |||| Sbjct 506 TAAT 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068552988110