Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1601 86.0 1e-11 >seq1601 Length=10099 Score = 86.0 bits (94), Expect = 1e-11 Identities = 239/364 (66%), Gaps = 2/364 (1%) Strand=Plus/Plus Query 72420 GCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCG 72479 || ||| ||||||| || | |||||| || ||| | | ||| |||||||| || Sbjct 6433 GCTTCTACGTCAGAATTATTTGGAAAGGTAAAAGCAGCTATTCAAGATGAAAATACGCCA 6492 Query 72480 TTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAAT 72539 ||||||||| | || || | | ||||||| ||||| || ||| || | |||| Sbjct 6493 TTTTATCCTGTATCACCATATGCTATTGCAAAATTGTATGCCCATTATATAACAATAAAT 6552 Query 72540 TACCGTGAGTCGTATAACATGTATGTATGCAACTCG-ATTTGTTTCAATCACGAGAGTCC 72598 || | || || ||||| |||| | | || | | | || | || ||||| || ||||| Sbjct 6553 TATAGGGAATCATATAATATGTTT-TGTGTGAATGGCATATTATTTAATCATGAAAGTCC 6611 Query 72599 CAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTTCAA 72658 | ||||| | || || ||| | ||||| || | || | || | |||| || Sbjct 6612 AAGAAGAGGGGAAACATTTGTTACTAGGAAAATAACTAGGGGTATTGCAAGAATTTGTAA 6671 Query 72659 TGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGC 72718 ||| ||| | || | || ||||| ||| | | ||||||||||| |||| Sbjct 6672 AAATGTTCAAACAGTTATAACGTTAGGAAATATTGATACATACAGAGATTGGGGGCATGC 6731 Query 72719 GAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGT 72778 || ||||| ||| | || |||| || ||| | |||||||||| || || || | ||| Sbjct 6732 TAAAGATTATGTACATGCCATGTATTTAATGTTACAACAAGATAAACCTGACGATTTTGT 6791 Query 72779 GATT 72782 ||| Sbjct 6792 TATT 6795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179544518879060