Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1821 125 5e-24 >seq1821 Length=1654 Score = 125 bits (138), Expect = 5e-24 Identities = 153/204 (75%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||||||||||| || ||||| || |||||||| |||||||||| | | Sbjct 380 CCACCTCTTAATCTTAAAACTAAGTGTAGGGTTGACTCTTTTTGAATGTTGTAAT--CCG 437 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || |||| | |||||||||||||| || || |||| || | |||||| || || Sbjct 438 ACAATGTTCTTCCATCTTCTAATTGTTTTCCCGCAAATATTAATCTCTGTTGATCAGGTG 497 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTAT-TTTCT 15126 |||||||||||||||| ||||| || ||| | || |||||||| | || ||| Sbjct 498 GAATTCCTTCCTTGTCTTGTATTTTAGCCTTAACATTCTCAATAGTATC-CGATGGTTCA 556 Query 15127 ACGTCTAAGGTAATGGTTTTACCT 15150 || || | || || ||||| ||| Sbjct 557 ACATCAAGAGTTATAGTTTTTCCT 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357360333951950