Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq260 389 2e-102 seq428 239 2e-57 seq1502 228 3e-54 seq3920 181 4e-40 seq1821 170 8e-37 seq401 127 8e-24 seq170 127 8e-24 seq1394 114 5e-20 seq1378 111 6e-19 seq1059 105 3e-17 seq862 87.8 7e-12 >seq260 Length=2304 Score = 389 bits (430), Expect = 2e-102 Identities = 1116/1669 (67%), Gaps = 77/1669 (5%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || ||||| || || | ||||| || | |||||||| ||||| | ||||| ||| Sbjct 156 GCCATTGGTATCGACTTGGGAACAACGTACTCATGTGTTGGTGTATGGAGAAATGAAAAC 215 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || || ||||||||||| || || ||| |||| || || || | || ||||| Sbjct 216 GTGGACATTATAGCAAACGATCAGGGAAATAGAACAACCCCATCGTATGTTGCCTTTACT 275 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAA 451091 ||| |||| ||||| |||| | || || || | ||| || | ||| | ||| Sbjct 276 GATACAGAGAGACTAATAGGAGATGCAGCAAAGAACCAA--GTTGCTAGGAATCCGGAAA 333 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGA-TGATACTGTACAA 451150 | || |||| |||||| || | |||||||| | | | | || | || |||| ||| Sbjct 334 ATACTGTATTTGATGCAAAGAGATTAATTGGAAGGAAATTTACAGAATCAT-CTGTGCAA 392 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA-TCAA----AAAGGAAAGCCCTAT- 451204 | || | || | || || | |||||| ||| | | || | || || Sbjct 393 AGTGATATGAAG--CATTGGCCATT-TACAGTAAAGTCAGGTGTAGATGAGAAACCAATG 449 Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 ||| |||| | || |||| |||| ||| ||| ||| |||||||||||||| ||| Sbjct 450 ATTGAAGTTACATACCAAGGGGAAAAGAAATTATTTCATCCCGAAGAAATTTCATCAATG 509 Query 451265 GTTCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTC-TCCAGTTACTGATG 451322 ||| |||| ||| |||||||||| |||||| || | | ||| |||| | | ||| Sbjct 510 GTT-TTACAAAAGATGAAAGAAAATGCAGAAGCATTTTTAGGTAAATCCA-TAAAGAATG 567 Query 451323 CAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAG 451382 | ||||||||||| || || ||||| || ||| | ||| | |||||||| |||||||||| Sbjct 568 CTGTAATTACTGTACCAGCATATTTTAACGATTCTCAAAGACAAGCAACAAAAGATGCAG 627 Query 451383 GACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAG 451442 | |||||||| || ||||| | |||||||||||||||| || ||||| || ||| Sbjct 628 GTACCATTGCTGGATTGAATGTAATGAGAATTATTAATGAACCAACTGCAGCAGCAATAG 687 Query 451443 CATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTG 451502 ||||||| || || ||||| || | ||||||||||||||| | || ||||| | Sbjct 688 CATATGGTTTACATAA---AAAAGGAAAGGGGGAAAAAAATATTTTAATTTTCGATTTAG 744 Query 451503 GTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGG 451562 | ||||| || |||| ||| | | ||||||||||||| |||| ||||| || | Sbjct 745 GAGGAGGTACATTTGATGTATCTTTGTTAACAATTGAAGATGGTATATTCGAAGTGAAAG 804 Query 451563 CAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGT 451622 |||| || ||||| || |||| ||||||||| ||||||| | | || | | | Sbjct 805 CAACAGCAGGAGATACACACTTAGGTGGTGAAGATTTTGATAACAGACTAGTTAATTTCT 864 Query 451623 -TGAAAACTGATGTTCA-ACGAAAACTAAAAGT--AGATATTTCTACTAACCAAAAAGCA 451678 || | | ||| || | | |||| || || |||| | || | || | |||| Sbjct 865 GTGTAGA-AGATTTTAAGAGAAAAAATAGGGGTAAAGATTTATCAAAAAATAGTAGAGCA 923 Query 451679 CTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTAC--ACTCA-GTTCAACACAA 451735 | ||| | | | |||| | |||| || ||| ||| ||| || |||||| Sbjct 924 TTAAGAAGGTTAAGAACACAATGTGAAAGGGCCAAACGTACGTTGTCATCCTCTACACAA 983 Query 451736 ACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACC 451795 |||| || | |||||| | |||| || || |||||| | || | | Sbjct 984 GCTAC---CATCGAAATTGATTCCCTTTTTGAAGGTATAGATTATAGTGTAACAGTAAGT 1040 Query 451796 CGTGCTAAATTTGAATCAATTTGT-TCCAGTATTTTTGCACGGGTA--ATGAAACCTGTT 451852 | || | ||||||| | ||| | | ||||| || || || | ||| || Sbjct 1041 AGAGCAAGATTTGAAGAGTTATGTATTGACTATTT---CAGGGATACGTTAGTACCAGTA 1097 Query 451853 GATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTG---ATGAAATTGTGCTT 451909 || |||| ||| | ||| ||| || |||| |||| || ||||| |||| | Sbjct 1098 GAGAAAGTCTTAAAAGATGCTATGATGGATAAA---AAAAGTGTACATGAAGTTGTTTTA 1154 Query 451910 GTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGA--G 451967 || || ||||| |||||||||||||| || ||| | || | || ||||| | | Sbjct 1155 GTTGGTGGTTCAACACGAATTCCTAAGATACAA-ACAT-TAATCAAAGAATTTTTTAACG 1212 Query 451968 GAAAACAACTATGTAAGAGC-GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 | ||| || |||| ||| | | || || ||||||||||| ||||||||||| ||||| Sbjct 1213 GCAAAGAAGCATGT-AGATCTATTAACCCAGATGAAGCTGTAGCATATGGTGCAGCAGTA 1271 Query 452027 CAAGCAGCTATTCTAACAGGT--TCAG----ATGATGAAAAATTAGGAGATATTCTGTTA 452080 |||||||| || || | ||| |||| ||| || | |||| | ||||| Sbjct 1272 CAAGCAGCAATATTATCGGGTGATCAGTCCAATGCTG------TTCAAGATTTATTGTTA 1325 Query 452081 GTAGATGTA-ACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTT 452139 |||||||| | ||| |||| | || | ||||| |||||||| | ||||| || || Sbjct 1326 TTAGATGTATGCTCCT-TATCCTTAGGTTTAGAAACTGCTGGTGGTGTTATGACAAAATT 1384 Query 452140 AATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAG-TG 452198 ||| || || || ||||||| ||||| ||||||| |||| || | | | || Sbjct 1385 GATTGAAAGAAATACAACTATTCCAGCAAAAAAAAGTCAAATCTTTACGAC-GTATGCTG 1443 Query 452199 ATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATA 452258 |||||||||||||||| || ||||| | |||||||||| | ||| | ||| ||||| Sbjct 1444 ATAACCAACCAGGTGTGTTAATCCAAGTATATGAAGGAGAAAGAGCATTAACAAAAGATA 1503 Query 452259 ATAATAAACTAGGAGAATTTACTCTTTCAAA---CATTCCTCCTATGCCAAGGGGAACTC 452315 ||||| |||| |||| || || | | || || ||| || ||| | | Sbjct 1504 ATAATTTGTTAGGTAAATT---TCATTTAGATGGTATACCACCTGCCCCTAGGAAAGTAC 1560 Query 452316 CTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTG 452375 | ||||||||| |||| | |||| | ||||||||||| ||| | ||||| | || |||| Sbjct 1561 CACAAATTGAAGTTACGTTTGATATAGATGCAAATGGAATTTTAAATGTTACAGCTGTTG 1620 Query 452376 A-AAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCT 452434 | || | || | |||||| | | | ||||| ||||| |||||||| | ||||| Sbjct 1621 AGAAGAGCA-CGGGAAAACAAAATCATATTACTATTACCAATGATAAGGGTAGGTTATCC 1679 Query 452435 AAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACA- 452493 ||||| ||||| ||||| |||| |||||||||| || | || |||||| | Sbjct 1680 CCTGAAGAAATTGATCGTATGGTTAATGATGCAGAAAAATATAAAGCAGAGGATGAAGAG 1739 Query 452494 AGTTAGAAAACATGTTGAAGCTAAAAACAAACTAGAAGGATATTGTTAT 452542 | | |||||| | ||||||| | ||| | |||||| ||||| ||| Sbjct 1740 AATAAGAAAAGA-ATTGAAGCAAGAAATAGTCTAGAAAACTATTGCTAT 1787 >seq428 Length=3574 Score = 239 bits (264), Expect = 2e-57 Identities = 472/690 (68%), Gaps = 15/690 (2%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 || ||||||||||| ||||| || | | ||||| ||||| | | ||||||||| || Sbjct 2378 ATAGGAATTGATCTGGGAACGACTTATAGCTGTGTTGGTGTGTTCAAAAATGGAAGAGTG 2319 Query 450977 GAAATTATAGCA-AATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGA 451035 ||||| || | | || || ||| || | |||||| || | ||| |||| || Sbjct 2318 GAAAT-ATTGAATAACGAGTTAGGTAATCGTATTACTCCATCCTATGTATCTTTTGTTGA 2260 Query 451036 TTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAAACAC 451095 | |||||| | || |||| || || | | | | || | | | | | | || Sbjct 2259 TGGGGAAAGAAAAGTTGGTGAAGCAGCCAAGTTAGAAGCTACTTTACACCCAACACAGAC 2200 Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGA 451155 || | ||||| || | ||||| || | | | ||||||| | ||| ||| || Sbjct 2199 TGTGTTTGATGTAAAGAGATTAATAGGTAGGAAATTTGATGATCAAGAAGTAGTAAAGGA 2140 Query 451156 GAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAA 451215 | || ||| || ||||||| |||| || | ||||||| || ||||| |||| | Sbjct 2139 TAGAACATTATTACCTTATGACATAGTGAACAATGAAGGAAAACCAAATATTAGAGTACA 2080 Query 451216 TTATAAAGGTGAAAC-TAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 ||||||| ||| || || ||||| |||||| ||||| ||||||| ||| | Sbjct 2079 A-ATAAAGGACAAAAGTACTACATTTGCACCTGAACAAATTAGTGCTATGGTA-TTAGAA 2022 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || |||||||||| ||| || | | | || ||||||| |||||||| |||| Sbjct 2021 AAGATGAAAGAAATAGCTCAATCCTTTTTAGGAAAACCAGTTAAAAATGCAGTAGTTACA 1962 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || || ||||| |||||||| ||| | ||||| || ||||| |||||| |||||| Sbjct 1961 GTACCAGCATATTTTAATGATGCTCAAAGACAAGCTACAAAAGACGCAGGAACAATTGCT 1902 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||||||| || | || |||||||||||||| || || |||||| |||||||||| || Sbjct 1901 GGTTTAAATATTGTACGTATTATTAATGAACCAACTGCTGCTGCTTTAGCATATGGTTTA 1842 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| ||||||| | ||| ||||||| || || ||||||||||| Sbjct 1841 G-------ATAAGAA--GGAAGAAACTAGTATATTAGTATACGACTTAGGTGGAGGAACA 1791 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| || | ||| ||||| |||| || || |||||| | ||||| ||| Sbjct 1790 TTTGATGTATCAATTCTTGTTATTGATAATGGTGTTTTCGAAGTATATGCAACAGCAGGT 1731 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 |||| ||| |||| || |||||| | ||| Sbjct 1730 AATACACATTTAGGTGGAGAAGATTTCGAT 1701 Score = 235 bits (260), Expect = 2e-56 Identities = 469/688 (68%), Gaps = 15/688 (2%) Strand=Plus/Minus Query 451845 AACCTGTTGATCAAGTATTACATGATTCTAAA-ATTAGTAAAGATAAAATTGATGAAATT 451903 |||| ||| | |||||||| ||||| | ||| || | |||| ||||||||| ||||| Sbjct 1459 AACCAGTTAAAAAAGTATTAGATGATGCAAAATATGAAAAAAG-TAAAATTGACGAAATA 1401 Query 451904 GTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTT 451963 || | ||||| ||||| ||||| || |||||||||||| | || | || |||| Sbjct 1400 GTCTTAGTAGGTGGTTCAACACGTATACCTAAAATTCAACAAATAATTAAAGATTTTTTT 1341 Query 451964 GGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCA 452023 || ||| ||| | || | | ||||| ||||||||||| || ||||||||||| Sbjct 1340 AATGGTAAAGAACCAAATAGAGGAATTAATCCAGATGAAGCTGTAGCTTATGGTGCTGCT 1281 Query 452024 GTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTA 452083 | ||||||| |||| | || || || ||| ||||| |||| | | ||| || Sbjct 1280 ATCCAAGCAGGTATTAT------TTTAG--GA-GAAGAATTACAAGATGTAGTTTTATTA 1230 Query 452084 GATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATT 452143 |||||||| || | || | || ||||||| | |||||| || |||||| | | ||| Sbjct 1229 GATGTAACTCCATTGACTTTAGGTATTGAAACTGTTGGTGGGATTATGACTCAACTTATT 1170 Query 452144 AAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTAC--AGCAAGTGATA 452201 ||| || || ||| || ||||| ||||||||| ||| | |||| ||| Sbjct 1169 AAAAGAAATACAGTTATACCAACAAAAAAATCACAAACATTTTCTACTTATCAAG--ATA 1112 Query 452202 ACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATA 452261 ||||||||| ||| |||||||| |||||||||||||| ||| | ||| ||||||| Sbjct 1111 ACCAACCAGCTGTCTTAATTCAAGTTTTTGAAGGAGAACGAGCATTAACAAAAGATAATC 1052 Query 452262 ATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAA 452321 || | ||||| ||||| | || ||||| ||| | ||| || || ||| Sbjct 1051 ATTTATTAGGAAAATTTGAATTATCTGGTATTCCACCTGCACAAAGAGGTGTACCAAAAA 992 Query 452322 TTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAAT 452381 ||||| | || | | ||||||| |||||||| | |||| |||| || ||| Sbjct 991 TTGAAGTCACATTTACTGTTGATAAGAATGGTATATTACATGTTGAAGCAGAAGACAAAG 932 Query 452382 CATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAG 452441 | |||| || || || |||||| ||||| ||||||||| | ||||| || ||| Sbjct 931 GAACTGGTAAGTCTAAAGGAATTACTATTACCAATGATAAAGGTAGATTATCAAAGGAAC 872 Query 452442 ATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACAAGTTAGAA 452501 | || ||||| ||| | | || || ||||| || || || ||| || | | ||| Sbjct 871 AGATAGAAAAGATGATTAACGACGCTGAAAAGTTTGCTGACGAGGATAAAAATTTAAGAG 812 Query 452502 AACATGTTGAAGCTAAAAACAAACTAGA 452529 || | || || | ||||| || |||| Sbjct 811 AAAAAGTGGAGTCAAAAAATAATTTAGA 784 >seq1502 Length=19671 Score = 228 bits (252), Expect = 3e-54 Identities = 551/826 (67%), Gaps = 20/826 (2%) Strand=Plus/Plus Query 496977 TGGGATTTATATaaaaaaaTGGAAGCAGCTTTTTGGACAGCTGAAGAAATAGATTGGTCT 497036 ||||| || ||||||||| ||||| | ||||||||||| ||||| ||||||| || Sbjct 5058 TGGGACTTTTATAAAAAAGCAGAAGCTTCATTTTGGACAGCAGAAGAGATAGATTTATCA 5117 Query 497037 AAAGATAAACATGATTTTAAAAAATTAAATCAAGATGAACAACGATTTATTAAATATGTA 497096 | ||| | |||||| ||||||||||| || ||||| ||| ||||| ||| |||| Sbjct 5118 AGCGATTTGAAAGATTTTGAAAAATTAAATGAAAATGAAAAACATTTTATAAAACATGTG 5177 Query 497097 TTAGCAtttttttCGGCAAGTGATACAATTGTAAATATTAATTTAGG--AGAAAGATTAT 497154 |||||||||||| | ||||||||| ||| || || || || || || || || | Sbjct 5178 TTAGCATTTTTTGCAGCAAGTGATGGAATAGTTT-TAGAAAATTTGGCTAGTAAATTTTT 5236 Query 497155 CTCATGAAGTTCAACCACTTGAAGCCAA--AATTGCTTATACTTTTCAAATGATGATGGA 497212 | ||||||||| | ||||| || |||| |||| |||||||||| |||| Sbjct 5237 AAGA-GAAGTTCAAATAACGGAAGCTAAGAAATT--TTATTCTTTTCAAATAGCAGTGGA 5293 Query 497213 AGGGATCCATAGTGAAGTATATGCACTTCAA--ATAGATAATATAATAGAAGATGTTCAA 497270 || ||| ||| || || || || |||||| ||| | |||| | Sbjct 5294 GAATATTCATTCAGAAACTTA--CAGTTTGTTGATTGATAATTATATAAAGGATGAAAAG 5351 Query 497271 GAGAGAAAAGATATTTTAAATTCAATAGAAACTGTACCCTGTATTAAAGCAAAAACTGAT 497330 ||| || | || | || | ||||||||| | |||| | ||||| ||| || Sbjct 5352 GAGCGATTAAATTTATTTCACGCAATAGAAAATATACCAGCTGTTAAAAATAAAGCTTTG 5411 Query 497331 TGGATGTTAAAATGGGTTAAATCTGAAGAAAGTTTTGCAACAAGAATGGTGGCACAAGTA 497390 ||| |||||| |||| | | ||||||| | | || || ||| | | | Sbjct 5412 TGGGCTGCCAAATGGATTAATAATACCAATTCTTTTGCAGAACGGATAGTAGCAAATGCA 5471 Query 497391 ATTTCTGAAGGATTAttttttagtggaagtttttgtgctattttttGGTTaaaaaataaa 497450 | ||||| |||| |||||||| ||||||||||||||||| ||||| ||||| || Sbjct 5472 TGTGTAGAAGGTATATTGTTTAGTGGTAGTTTTTGTGCTATTTTCTGGTTTAAAAAACAA 5531 Query 497451 aaTATAATGCCTGGTTTAATCTCATCAAATGAATTAATTGCACGGGATGAAGGAATGCAT 497510 |||| | | | ||| ||| | |||||||||||| | ||||||||| | ||| Sbjct 5532 AATAAATTACATGGGCTAACTTTTAGTAATGAATTAATTAGTAGAGATGAAGGATTACAT 5591 Query 497511 TGTGATTATAGTATTATGTTATATCACATGCTTCAAAATAAACTGTCACAAGAAAAAATT 497570 || | || | | ||||| |||| |||||||| | || |||||| || Sbjct 5592 ACAGACTTTAACTGTTTAATATATAGTCTGCTGGAAAATAAATTACCAGAAGAAATTGTT 5651 Query 497571 CAACAAATGTTTAAAGATGCAGTGGAAACAGAAAGAATATTTATTTGTGAAAGCTTACCA 497630 || | || | ||||| ||||| ||| |||| || |||||| |||||| ||||| Sbjct 5652 CAGAATATTGTAAAAGAAGCAGTAGAAGTAGAACGATCATTTATATGTGAATCTTTACCT 5711 Query 497631 TGCTCCTTATTAGGAATGAATGCGGACCTAATGGAACAATACATTAAATTTGTGGCTGAC 497690 || ||| ||||||||||| | ||||| |||||||||| |||||||||||| Sbjct 5712 TGTGACTTGATAGGAATGAATTCAAGATTAATGTCACAATACATTGAATTTGTGGCTG-- 5769 Query 497691 CAATTAATTATTAAA----TTAGGATATAATAAAATATTTAAAGTAGATAATCCATTTAC 497746 || ||| ||| | ||||||| ||| | ||| | | | ||||| |||| Sbjct 5770 --ATAGATTGTTAGAATGTTTAGGATGCTCAAAAGTCTTTTATTCAAAAAATCCTTTTAA 5827 Query 497747 ATGGATGGAAGCAATTTCAATTGAAGGTAAAACTAATTTCTTTGAA 497792 |||||||| || || || |||| ||||| ||||| || ||| Sbjct 5828 TTGGATGGATTTGATATCTCTTCAAGGAAAAACAAATTTTTTCGAA 5873 >seq3920 Length=5462 Score = 181 bits (200), Expect = 4e-40 Identities = 249/347 (72%), Gaps = 11/347 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| |||||| | ||| | || ||| | | || || ||||| Sbjct 3133 AAAATGAAAGAAACTGCAGAAAATTATTTAGGAAGAAAAGTGCATCAAGCTGTTATTACA 3074 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || || ||||| |||||| | ||| | |||||||| ||||||||||| | ||||| Sbjct 3073 GTACCAGCATATTTTAATGATTCTCAAAGACAAGCAACAAAAGATGCAGGTAAAATTGCA 3014 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 |||||| |||| | |||||||||| ||||| |||||||||||| |||||| |||| || Sbjct 3013 GGTTTAGATGTATTAAGAATTATTAACGAACCAACAGCAGCTGCTTTAGCATTTGGATTA 2954 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | || ||| || | ||| ||| ||||| ||| || || || || || Sbjct 2953 G---------AAAAAAGTGATGGAAAGGTAATTGCAGTATATGACTTAGGAGGTGGTACA 2903 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 ||||| ||| | | |||| || || |||||||||||||| ||||| |||||| Sbjct 2902 TTTGATATATCTATTTTAGAAATTTTAGGAGGTGTATTTGAAGTAAAAGCAACAAATGGT 2843 Query 451574 GATAC-TCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 |||| || | ||||||| |||||| ||||| | |||| | |||| Sbjct 2842 AATACATCCT-TAGGAGGGGAAGATTTTGATCAAAGAATTTTAGAAT 2797 >seq1821 Length=1654 Score = 170 bits (188), Expect = 8e-37 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 391077 GGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAA 391136 || |||||||| ||||||||||||||| |||| |||| ||||| | |||| ||| Sbjct 579 GGAAAAACTATAACTCTTGATGTTGAACCATCGGATACTATTGAGAATGTTAAGGCTAAA 520 Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196 || ||||| |||||||||||||| ||||||||||| | ||||| || | || |||||| Sbjct 519 ATACAAGACAAGGAAGGAATTCCACCTGATCAACAGAGATTAATATTTGCGGGAAAACAA 460 Query 391197 CTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTA 391256 | |||||||||||||| ||| ||||||| || ||| | || || |||| || |||||| Sbjct 459 TTAGAAGATGGAAGAACATTGTCGGATTACAACATTCAAAAAGAGTCAACCCTACACTTA 400 Query 391257 GTATTAAGACTGAGAGG 391273 || |||||| | ||||| Sbjct 399 GTTTTAAGATTAAGAGG 383 >seq401 Length=4692 Score = 127 bits (140), Expect = 8e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 420724 CTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAATCTTCTACCA 420783 ||||||||||||| || | |||||| | ||||| | | ||||| |||| | Sbjct 2602 CTTCTTCCAGCTCTGCCCGACATTTGTGTATATTCAGACGATGTTAAGATTCTTTTTTTT 2543 Query 420784 CAATCATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCATATTTACACCA 420843 ||| ||||| |||| ||| ||||| ||||| | |||||| |||||||||| ||| Sbjct 2542 AAATGATCATGTTTATATATAGATGTAAAAACAACTGATTTTGTTGGCATATTTATACCC 2483 Query 420844 ACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAATAAAGAATTTCA 420903 | || ||| ||||||||||| || || | ||| |||||| ||||||| |||| ||||| Sbjct 2482 ATAGCAAATGTTTCAGTTGCAAATAATATTTTTATTAATCCTTTTGAAAAAAGTATTTCT 2423 Query 420904 ACAATTTCTTTTAAAATAGG 420923 || |||||||| | ||| || Sbjct 2422 ACTATTTCTTTAAGAATTGG 2403 >seq170 Length=9591 Score = 127 bits (140), Expect = 8e-24 Identities = 334/499 (67%), Gaps = 18/499 (4%) Strand=Plus/Minus Query 248475 AAATT--CAACTAAACATGGACAAAAAGGAACAGTTGGTATTACTTTGCCACAAAGAGAT 248532 ||||| ||| || |||||||||||| || ||| | || ||||| | | |||| Sbjct 5670 AAATTTGCAAGTAGACATGGACAAAAGGGTACAATAGGAATTACATATAGAATTGAAGAT 5611 Query 248533 ATGCCTTTCACATCAGAAGGTATGACTCCAGATTTAATTTTCAATCCACATGGTATGCCT 248592 ||||| || | ||||| |||| ||||||| ||||| | |||||||||| | | || Sbjct 5610 ATGCCATTTAGTTCAGATGGTACATATCCAGATATAATTATGAATCCACATGCTGTTCCA 5551 Query 248593 ACACGTATGACTATGGGACAATTAGCAGAAACACTTGCATCAAAAGCTGCAGCTAATATT 248652 | ||||||||||| || || |||| |||| | || ||||| ||||| |||| Sbjct 5550 TCTCGTATGACTATTGGGCATTTAGTAGAATGTTTGTCAGGAAAAGTGGCAGC-AATAGA 5492 Query 248653 GGTGAATT--ATTTGATGGAACACCTTTTTC-AGATTATGATGTTACCGAAATTCCTA-- 248707 | ||| | | |||| |||||| ||||| | | || | ||| |||||| | | Sbjct 5491 AG-GAAGTGAAGGGGATGCAACACCATTTTCTAAAATAACA-GTTCAAGAAATTTCAAAT 5434 Query 248708 AAGTTCTAAAAGAATTAGGAATGGATGAATATGGAACTGAAGAAATGTATTGTGGAATGA 248767 || || | | |||||||| || ||||||||| ||| | | ||| |||| | Sbjct 5433 AAATTGCATA--AATTAGGATATGAGAAATATGGAAATGATATATTATATAATGGACATA 5376 Query 248768 CAGGGCGGAAAATG---AAAGCTAGAATTTTCATTGGTCCTATGTTTTATTTGAGACTTA 248824 | |||||||| ||| | | |||||| |||||||| | | |||| || | | Sbjct 5375 ATG---GGAAAATGTTAAAATCAAAAATTTTTATTGGTCCGACTTATTATCAAAGGTTAA 5319 Query 248825 AACATATGGTACTTGATAAAGTTCATTCCAGAAGTATGGGTCCTAGACAAGCTATTACTA 248884 |||||||||| |||||| | ||| | ||||||| || ||| | ||||| Sbjct 5318 AACATATGGTTGAAGATAAAATACATGCTAGAAGTAGAGGACCTTTAACTATGATTACAC 5259 Query 248885 GACAACCCATGGAAGGACGTTCTAAAGATGGAGGTCTTAAAATTGGAGAGATGGAAAAAG 248944 | ||||| | |||||| | || | |||||| ||||| |||| || ||||||| || Sbjct 5258 GTCAACCAACAGAAGGAAGATCAAGAGATGGTGGTCTACGTTTTGGTGAAATGGAAAGAG 5199 Query 248945 ATGCAATGGTTGCTCATGG 248963 || ||| || | ||||| Sbjct 5198 ATTGTATGATTTCACATGG 5180 >seq1394 Length=7918 Score = 114 bits (126), Expect = 5e-20 Identities = 292/434 (67%), Gaps = 9/434 (2%) Strand=Plus/Minus Query 364551 GATACACAAAGAAGTATTCC-ATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAAT 364609 |||||| |||||||||| || | | ||| | ||||||| |||||| |||||||||| | Sbjct 4941 GATACAGAAAGAAGTATACCGAACATTA-TGGATGGATGGAAACCTGGTCAAAGAAAAGT 4883 Query 364610 TTTTTATGGAGCAAATTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGC 364669 | ||||| | ||||| || | | ||||| || || |||||||| ||||||| Sbjct 4882 ACTATATGG--CTGTTTTAAAAGAAATTTAAAAA-ATGAATGTAAAGTAGCACAATTAGT 4826 Query 364670 AGGTTTTGTATCTGACCGGGTAGCTTATCATCACGGTGAGGCAAGTTTA-ATGGGAGCAA 364728 || | | || | || | || |||||||| || ||| | ||| | || || Sbjct 4825 TGGATATATAGCAGAGCATAGTGCATATCATCATGGAGAGTCTTCATTACAACAGACCAT 4766 Query 364729 TAATTGGAATGGCACAAAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAG 364788 || || |||||||||| ||||| ||| |||||| | || || |||||||| | Sbjct 4765 TA-TTAACATGGCACAAACATTTGTAGGATCAAATAATATTAACTTTTTAGAACCATGTG 4707 Query 364789 GACAATTTGGAAGTCGAGTAATGGGAGGTAAAGATTCTGCCAGC-CCACGTTATATTTGG 364847 |||||||||| ||| || | |||||| |||||| | |||| | | ||||||| Sbjct 4706 GACAATTTGGTAGTAGAAAAGAGGGAGGAAAAGATGC-ATCAGCAGCTAGGTATATTTTT 4648 Query 364848 ACCAAACTTGAAAAAGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAAT 364907 |||||| | | | | || || ||||||| || | ||| |||| || ||||| Sbjct 4647 ACCAAATTGGCTAGTTCGACAAGAAGTATATTTAATGAATATGATGATCCTATATTAAAA 4588 Query 364908 TATATTAATGATGATGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATG 364967 ||| | || || || || || | ||||| ||| |||| | ||| |||| || | Sbjct 4587 TATTTAAACGAAGAAGGTCAAAAAATAGAACCACAATATTATATACCTGTTATACCAACT 4528 Query 364968 ATTTTAGTAAATGG 364981 || | || ||||| Sbjct 4527 ATACTGGTGAATGG 4514 Score = 95.1 bits (104), Expect = 5e-14 Identities = 172/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 363737 AATTAGAGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAA 363796 ||||| || || ||||| |||||||||||||| | ||||| | ||| || ||| | Sbjct 5725 AATTATCGGTATCCCTAAGTTAGAAGATGCTAATGATGCAGGTAGTAAATATAGTCAAGA 5666 Query 363797 ATGTGGATTATATTTAGCAGAGGGAGATTCTGCTCTTTCTATGATTCTGT----CAGGGT 363852 |||| ||| ||| |||| |||||| |||| | | |||| | || | Sbjct 5665 ATGTACCTTAATATTAACAGAAGGAGATAGTGCTAAAACG----TCCTGTTTAGCTGGTT 5610 Query 363853 TATCAAGTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATG 363912 |||| | | || |||| || ||||||| ||||| || ||||| ||||||||||||| Sbjct 5609 TATCTATTGTAGGTAGAGATAAATATGGTGTGTTTCCATTGAAAGGTAAATTATTAAATG 5550 Query 363913 TAAGAGAAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaa 363972 ||||||| || || | |||||| | |||| || | || ||| ||| || |||| Sbjct 5549 TAAGAGATGCTTCGTTCAAACAATTAATGGACAACAAAGAAATACAAAATATTTTCAAAA 5490 Query 363973 TTTTAGGATTA 363983 || | || ||| Sbjct 5489 TTATGGGCTTA 5479 >seq1378 Length=4202 Score = 111 bits (122), Expect = 6e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 499562 ATTAAATAAAATTATTGATTATAACCGTGATTATTCATT-TGAtttttttGGTATTAAAA 499620 ||| |||||| |||||||||| ||||||| || ||| ||||| |||||| |||| | Sbjct 594 ATTGAATAAAGAAATTGATTATACACGTGATT-TTAATTATGATTATTTTGGATTTAAGA 652 Query 499621 CAATGGAAAGAACCTATATAACAAAACTAGATGGTCACTTAATTGAAAGACCTCAAGATG 499680 || | |||||| | ||| || | | | | | ||||||||||| ||| || Sbjct 653 CATTAGAAAGATCTTATTTATTACGTATTAACAACAAAATTATTGAAAGACCACAACATT 712 Query 499681 TGTTCATGCGAGTAGCATCTCTTGTACATTGTGGTGATTTACAAAAAACAATAGATTCAT 499740 | || ||| ||||| | | ||||| || |||| || | ||| || |||| | | Sbjct 713 TATTAATGAGAGTATCGATAGGTATACATATTGATGATATAGATAAAGCATTAGAAACTT 772 Query 499741 ATAATTTAATGTCaaaaaaaTATTTTACTCATGCTAGTCCTACATTATTTAAT 499793 || |||| ||||| |||||||||| |||||||||| || |||||||||||| Sbjct 773 ATCATTTGATGTCTCAAAAATATTTCACTCATGCTACACCAACATTATTTAAT 825 >seq1059 Length=5525 Score = 105 bits (116), Expect = 3e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||| | |||||| || ||||||| ||| |||||||||| | |||| ||| | || || Sbjct 2166 ATCTAATCCTCTCCTACCAGCTCTTCCAGCCATTTGAATATATTCTCCAGATGTTATTAA 2107 Query 420774 TCTTCTACCACAATCATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCAT 420833 |||| | | | ||||| |||| ||| |||||| ||||||||||| | ||||| Sbjct 2106 TCTTTTTTCTAAGCCATCAAATTTTTTTAAAGAAGTAAAGACAACAGTTTTAGCTGGCAT 2047 Query 420834 ATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAAC-TTTAATTAAtttttttGAAT 420892 ||||| || | |||||||||||| || || ||||| ||||| || | ||||| Sbjct 2046 ATTTATGCCCATAGAAAAAGTTTCTGTACTAAATAAAACTTTTAACAAAGACTCTTGAA- 1988 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACC 420932 | | ||||| | ||| ||||| | ||||| | || ||| Sbjct 1987 ACATTATTTCGATAATCTCTTTAATGATAGGTAATAAACC 1948 >seq862 Length=14765 Score = 87.8 bits (96), Expect = 7e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 163726 TATTTAATAGATGAATTAGCAATTAGAGTTGGAGGGAAAAAAGATGCAAAAGAAGAAGCA 163785 |||||||||||| ||||| | ||||||||||| |||| ||| | | ||||||||| Sbjct 5080 TATTTAATAGATTTTTTAGCTTTAAGAGTTGGAGGAGAAAAGGATATAGACGAAGAAGCA 5021 Query 163786 GATACAGTAGGTGTTACTAGTTTACGGGTAGAACAT 163821 ||||| |||||| | ||||||||| ||||||||| Sbjct 5020 GATACCGTAGGTTGTTGTAGTTTACGAGTAGAACAT 4985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975534368005160