Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq260 318 5e-81 seq428 246 2e-59 seq1378 185 7e-41 seq3920 172 4e-37 seq1394 147 2e-29 seq3356 129 5e-24 seq1654 116 3e-20 seq32 104 2e-16 seq574 102 7e-16 seq1821 95.1 1e-13 seq1150 91.5 1e-12 seq291 91.5 1e-12 seq162 89.7 4e-12 >seq260 Length=2304 Score = 318 bits (352), Expect = 5e-81 Identities = 646/947 (68%), Gaps = 37/947 (4%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 |||||| | || | ||||| |||||||||||||| ||||| || | ||||| ||| Sbjct 813 GGAGATACACACTTAGGTGGTGAAGATTTTGATAACAGACTAGTTAATTTCTGTGTAGAA 872 Query 551850 GATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 |||||||| ||||||| | | | ||| |||| | | | | ||| | | | Sbjct 873 GATTTTAAGAGAAAAAATAGGGGTAAAGATTTATCAAAAAATAGTAGAGCATTAAGAAGG 932 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 ||||||| || ||||| |||||||| | | ||||| ||| ||| | || || Sbjct 933 TTAAGAACACAATGTGAAAGGGCCAAACGTACGTTGTCATCCTCTACACAAGCTACCATC 992 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | ||||| | ||||| || || ||||||| | | | || || | |||| Sbjct 993 GAAATTGATTCCCTTTTTGAAGGTATAGATTATAGTGTAACAGTAAGTAGAGCAAGATTT 1052 Query 552027 GAAGATATTTGTTCTGATCTCTTT-AGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 ||||| | ||| ||| || ||| || | || | | ||||||||| |||| |||| Sbjct 1053 GAAGAGTTATGTATTGA-CTATTTCAGGGATACGTTAGTACCAGTAGAGAAAGTCTTAAA 1111 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 |||| | | ||| |||||| | ||||||||| |||| | |||||||| || ||| | Sbjct 1112 AGATGCTATGATGGATAAAAAAAGTGTACATGAAGTTGTTTTAGTTGGTGGTTCAACACG 1171 Query 552146 AATTCCTAAAATTCGCGAAATGTTAAGTTCTTA-----TTTCAATGGTAAAAAATTAAAT 552200 ||||||||| || | ||| |||| || | ||| || || ||| || | | Sbjct 1172 AATTCCTAAGATAC---AAACATTAA--TCAAAGAATTTTTTAACGGCAAAGAAGCATGT 1226 Query 552201 GAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 | | |||| |||||||| ||||| || |||||||| ||| | |||||||| || | Sbjct 1227 AGATCTATTAACCCAGATGAAGCTGTAGCATATGGTGCAGCAGTACAAGCAGCAATATTA 1286 Query 552261 TCTGGACAAACTGATGA----AAAACTA--CAAAAT--ATTGTACTTGTAGATGT-TACT 552311 || || |||| | || || ||| || ||||| || |||||| | || Sbjct 1287 TCGGG------TGATCAGTCCAATGCTGTTCAAGATTTATTGTTATT--AGATGTATGCT 1338 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 ||| |||| | ||||||||||| | ||| ||| ||||||| || | || || |||||| Sbjct 1339 CCT-TATCCTTAGGTTTAGAAACTGCTGGTGGTGTTATGACAAAATTGATTGAAAGAAAT 1397 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431 || |||||||| |||||| || | ||| | |||||| | ||||| ||| | | | Sbjct 1398 ACAACTATTCCAGCAAAAAAAAGTCAAATCTTTACGACGTATGCTGATAACCAACCAGGT 1457 Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT 552491 || ||| ||| | | ||||||||||||| ||| || |||||||||||| | ||| Sbjct 1458 GTGTTAATCCAAGTATATGAAGGAGAAAGAGCATTAACAAAAGATAATAATTTGTTAGGT 1517 Query 552492 ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACT 552551 | ||| ||||||| ||||| || ||||| ||| | |||||| |||||||||||||| Sbjct 1518 AAATTTCATTTAGATGGTATACCACCTGCCCCTAGGAAAGTACCACAAATTGAAGTTACG 1577 Query 552552 TTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA-ATCTAGCAACAA 552610 || ||||| ||||| ||||||||||| ||||| || ||| ||| || | | | | || Sbjct 1578 TTTGATATAGATGCAAATGGAATTTTAAATGTTACAGCTGTTGAGAAGAGCACGGGAAAA 1637 Query 552611 GAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACG 552670 | || |||||||| || || ||||| || | |||| ||||| | || Sbjct 1638 CA-AAATCATATTACTATTACCAATGATAAGGGTAGGTTATCCCCTGAAGAAATTGATCG 1696 Query 552671 TATGGTCGAAGAAGCTAAAGAATTTGAAGAAGCTGATAATAAGAGAA 552717 |||||| | || || || ||| | ||| || ||| ||||||| Sbjct 1697 TATGGTTAATGATGCAGAAAAATATAAAGCAGAGGAT--GAAGAGAA 1741 Score = 242 bits (268), Expect = 3e-58 Identities = 383/542 (71%), Gaps = 9/542 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| || || ||||| || || ||||||||||| ||| ||||| || Sbjct 156 GCCATTGGTATCGACTTGGGAACAACGTACTCATGTGTTGGTGTATGGAGAAATGAAAAC 215 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || ||||| || || ||||| || || ||||| || ||||| |||||| | || || Sbjct 216 GTGGACATTATAGCAAACGATCAGGGAAATAGAACAACCCCATCGTATGTTGCCTTTACT 275 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || || | || ||||||||||| | |||| || | ||||| ||| Sbjct 276 GATACAGAGAGACTAATAGGAGATGCAGCAAAGAACCAAGTTGCTAGGAATCCGGAAAAT 335 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| | |||||||| || | ||||||||||| | |||| || || |||| || Sbjct 336 ACTGTATTTGATGCAAAGAGATTAATTGGAAGGAAATTTACAGAATCATCTGTGCAAAGT 395 Query 550232 GATATGAAGCATTGGCC-TTTCCAA-ATTGTTAA-TGTTTCTGGAAAACCTTATATTGAA 550288 ||||||||||||||||| ||| || | || | ||| || ||||| |||||| Sbjct 396 GATATGAAGCATTGGCCATTTACAGTAAAGTCAGGTGTAGATGAGAAACCAATGATTGAA 455 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATT--TTCA-CCAGAACAAATTTCATCTATGGTT 550345 | ||| | |||| | || |||| |||| || ||| |||||||||| |||||| Sbjct 456 GTTACATACCAAGGG---GAAAAGAAATTATTTCATCCCGAAGAAATTTCATCAATGGTT 512 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 ||| || |||||| ||| || || ||| | ||| || | | | |||| ||| Sbjct 513 TTACAAAAGATGAAAGAAAATGCAGAAGCATTTTTAGGTAAATCCATAAAGAATGCTGTA 572 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || |||||||||||||||||||| || || ||| | ||||| || |||||||| || Sbjct 573 ATTACTGTACCAGCATATTTTAACGATTCTCAAAGACAAGCAACAAAAGATGCAGGTACC 632 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 ||||||||| | ||||| | | ||||| |||||||| ||||| || ||| | |||||| Sbjct 633 ATTGCTGGATTGAATGTAATGAGAATTATTAATGAACCAACTGCAGCAGCAATAGCATAT 692 Query 550526 GG 550527 || Sbjct 693 GG 694 Score = 89.7 bits (98), Expect = 4e-12 Identities = 199/294 (68%), Gaps = 15/294 (5%) Strand=Plus/Minus Query 361546 ATCTATATCTTCACCACCTAAATGTGTA-CTACCGCTAACTGCTAATGTTCTAAATAAGC 361604 ||| | ||||||||||||||| |||||| || | ||| |||| | |||| | Sbjct 845 ATCAAAATCTTCACCACCTAAGTGTGTATCTCCTGCTGT-TGCTTTCACTTCGAATATAC 787 Query 361605 CATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAA 361664 ||| | ||| | | | | | ||||| | ||| ||| | |||||||| | || | || Sbjct 786 CATCTTCAATTGTTAACAAAGATACATCAAATGTACCTCCTCCTAAATCGAAAATTAAAA 727 Query 361665 TATTCCCCCCGTTTTTATT--TTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGC 361722 |||| ||||| ||||| ||||| | | |||||| |||| || || Sbjct 726 TATT-------TTTTTCCCCCTTTCCTT-TTTTATGT---AAACCATATGCTATTGCTGC 678 Query 361723 AGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAA 361782 || |||||||| ||||| ||| | || ||||| | ||| || || | ||||||| Sbjct 677 TGCAGTTGGTTCATTAATAATTCTCATTACATTCAATCCAGCAATGGTACCTGCATCTTT 618 Query 361783 AGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTT 361836 || ||||| | ||| | ||| ||||||||||| || |||||||| || || || Sbjct 617 TGTTGCTTGTCTTTGAGAATCGTTAAAATATGCTGGTACAGTAATTACAGCATT 564 >seq428 Length=3574 Score = 246 bits (272), Expect = 2e-59 Identities = 377/539 (70%), Gaps = 9/539 (2%) Strand=Plus/Minus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || || ||||||||||| | | ||| | |||||| |||| | |||||||| || Sbjct 1508 AGAGCAAAATTTGAAGAGTTAAATGATGACTTATTTAGAGAAACTTTAGAACCAGTTAAA 1449 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| ||| ||| |||| ||| ||| ||| | | ||||| || | || ||| Sbjct 1448 AAAGTATTAGATGATGCAAAATATGAAAAAAGTAAAATTGACGAAATAGTCTTAGTAGGT 1389 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA 552194 || || ||| | || |||||||||| |||| | | || ||| ||||||||| || Sbjct 1388 GGTTCAACACGTATACCTAAAATTCAACAAATAATTAAAGATTTTTTTAATGGTAAAGAA 1329 Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 |||| | | ||||||||||||| ||||| || |||||||| || || ||||||| | Sbjct 1328 CCAAATAGAGGAATTAATCCAGATGAAGCTGTAGCTTATGGTGCTGCTATCCAAGCAGGT 1269 Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 ||| ||| ||| ||| || ||||| || | || | ||||||| ||||| Sbjct 1268 ATTATTTTAGGA---------GAAGAATTACAAGATGTAGTTTTATTAGATGTAACTCCA 1218 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 | || | ||| | ||||| ||||| || ||||||||| | ||||| | |||||||| Sbjct 1217 TTGACTTTAGGTATTGAAACTGTTGGTGGGATTATGACTCAACTTATTAAAAGAAATACA 1158 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434 ||| || |||||||| | ||||||||| ||| |||||| ||| | ||||| Sbjct 1157 GTTATACCAACAAAAAAATCACAAACATTTTCTACTTATCAAGATAACCAACCAGCTGTC 1098 Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494 ||||||| |||||||||||||| || ||| || ||||||||| || | | || | Sbjct 1097 TTAATTCAAGTTTTTGAAGGAGAACGAGCATTAACAAAAGATAATCATTTATTAGGAAAA 1038 Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 ||| | ||| |||||||| ||||| | | || ||||| |||||||||| || || Sbjct 1037 TTTGAATTATCTGGTATTCCACCTGCACAAAGAGGTGTACCAAAAATTGAAGTCACATT 979 Score = 188 bits (208), Expect = 6e-42 Identities = 381/551 (69%), Gaps = 16/551 (3%) Strand=Plus/Minus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 |||||| || ||| | ||||| || ||||| ||||||||||| | ||||||| | ||| Sbjct 2379 TATAGGAATTGATCTGGGAACGACTTATAGCTGTGTTGGTGTGTTCAAAAATGGAAGAGT 2320 Query 550054 TGAAATTATTGCC-AATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 ||||| |||| || || |||||| | | ||||||||| ||||| ||||| | Sbjct 2319 GGAAAT-ATTGAATAACGAGTTAGGTAATCGTATTACTCCATCCTATGTATCTTTTGTTG 2261 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | ||| ||||||||| ||||| || | |||| ||| | || || | | Sbjct 2260 ATGGGGAAAGAAAAGTTGGTGAAGCAGCCAAGTTAGAAGCTACTTTACACCCAACACAGA 2201 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA- 550231 || | ||||||| || | ||||| || || | ||| ||||| || || | Sbjct 2200 CTGTGTTTGATGTAAAGAGATTAATAGGTAGGAAATTTGATGATCAAGAAGT--AGTAAA 2143 Query 550232 -GATATGAAGCATTGG--CCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 |||| ||| |||| |||| | || || || | |||||||| ||||| | Sbjct 2142 GGATA-GAA-CATTATTACCTTATGACATAGTGAACAATGAAGGAAAACCAAATATTAGA 2085 Query 550289 GCTACTCATGAAGGATCT--GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | ||| || ||||| || ||| ||| |||| ||||||||| ||||||| | Sbjct 2084 G-TACAAATAAAGGACAAAAGTACTACA-TTTGCACCTGAACAAATTAGTGCTATGGTAT 2027 Query 550347 TAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || || |||||| ||| ||| || | ||||| | || || ||||| |||||||| Sbjct 2026 TAGAAAAGATGAAAGAAATAGCTCAATCCTTTT-TAGGAAAACCAGTTAAAAATGCAGTA 1968 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || |||||||||||||||||||| | ||| | |||||||| ||||| || ||| Sbjct 1967 GTTACAGTACCAGCATATTTTAATGATGCTCAAAGACAAGCTACAAAAGACGCAGGAACA 1908 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 |||||||| | ||| || | |||||||| |||||||| ||||||||||| | |||||| Sbjct 1907 ATTGCTGGTTTAAATATTGTACGTATTATTAATGAACCAACTGCTGCTGCTTTAGCATAT 1848 Query 550526 GGACTTGATAA 550536 || | ||||| Sbjct 1847 GGTTTAGATAA 1837 Score = 113 bits (124), Expect = 4e-19 Identities = 213/303 (70%), Gaps = 19/303 (6%) Strand=Plus/Plus Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACC-GCTAACTGCTAATG-TTCTAAATAAG 361603 ||| | |||||| ||||||||||||||| |||| ||| ||| || ||| ||| | Sbjct 1701 ATCGAAATCTTCTCCACCTAAATGTGTATTACCTGCTGT-TGCATATACTTCGAAAACA- 1758 Query 361604 CCATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATA 361663 ||||||| |||| | | | ||||| | ||||||| ||||||| || |||| || Sbjct 1759 CCATTATCAATAACAAGAATTGATACATCAAATGTTCCTCCACCTAAGTCGTATAC--TA 1816 Query 361664 ATATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCA 361723 |||| | |||| | ||| | ||| || || |||||| ||||| | |||| Sbjct 1817 ATATACTA---GTTTCT-----TCCT--TCTTA--TCTAA-ACCATATGCTAAAGCAGCA 1863 Query 361724 GCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAA 361783 || |||||||| ||||| || | || ||| | || || ||| || ||| ||| Sbjct 1864 GCAGTTGGTTCATTAATAATACGTACAATATTTAAACCAGCAATTGTTCCTGCGTCTTTT 1923 Query 361784 GTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTTCAACT 361843 || ||||| | ||| ||||||||||||||||| || || |||| ||||| |||| |||| Sbjct 1924 GTAGCTTGTCTTTGAGCATCATTAAAATATGCTGGTACTGTAACTACTGCATTTTTAACT 1983 Query 361844 TGT 361846 || Sbjct 1984 GGT 1986 >seq1378 Length=4202 Score = 185 bits (204), Expect = 7e-41 Identities = 925/1465 (63%), Gaps = 53/1465 (4%) Strand=Plus/Minus Query 684300 TTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATAAATATTTTCAGTAAAGGGC 684359 |||| |||| || | |||||| ||| ||||| ||||||| || |||| | || Sbjct 2123 TTAACGACAAAAAATTCTCCACTCAAAACTCTTCTATAATAAATGTTACTAGTATAAGGT 2064 Query 684360 TCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGCTGTGGGCATA----CAAGT 684415 || | | | || || | || | |||||||| ||| || || |||||| ||||| Sbjct 2063 TCAAAGGATTCGTTATTCCCAAGTATTTGAGATGTAGAAGCAGTTGGCATAGGTGCAAGT 2004 Query 684416 AGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATCATCAAACTATCCCAATC 684475 ||| ||| ||| || | ||||| ||| | || | | | | | |||||||| Sbjct 2003 AGT----AAAGAATTCCTTAAACCATGTTTACGTATTTTGAGCTTTAGTTCATCCCAATT 1948 Query 684476 CCACATTCCACTTAATTTATCCGAGCTAAGATTCCATAAATCAAATTGGAATTTTCCTTT 684535 ||| ||||| | | | | | | ||||| | ||||||||| | | |||| Sbjct 1947 CCAGT----ACTTACTATCTACCTTTTTA--TTCCACATATCAAATTGTAGAATACCTTG 1894 Query 684536 GGAAAGAGGACTTCCTATAAATGTTTCATAAGCACCAA-ATTCTTTGGATAATTTCATTG 684594 | ||||| || | | | |||||||| ||| | || ||| ||||| ||| | Sbjct 1893 ACTAGCTGGACTACCCTGATAAGATTCATAAGGTCCATGAATCATTGC-TAATTCCATAG 1835 Query 684595 ATTCTTCCAGACAACCAAAATAAATAGTTTCAAATATTTTACGATTGAGATCGCGAGCCA 684654 | ||| | | | || | || || ||||| |||||| | | ||| | || ||| Sbjct 1834 ACATTTCTAAAGCAGCATAGTACATGGTTTCGAATATTCTTCTATTCAACTCTTTAGCTT 1775 Query 684655 ATTCAGAATCAAATGGTGTTTTAAAAATCGCAAAAACATCCGCTACTCCTTGGACACCAA 684714 || || ||| | || | | |||| | |||| ||| |||| || || ||||| | Sbjct 1774 CATCCGACTCATAGGGATATCTCAAAAGCATAAAAGTATCTGCTAACCCCTGAACACCTA 1715 Query 684715 CACCAATTGGCCTATGTTTAATATTAGATACACGTGTTTTATCAACTGGATAAAAATTAA 684774 ||| || || ||||| | | ||||| || | || | || || ||| |||| Sbjct 1714 TACCTATAGGTCTATGCCTCTTGTTAGACACTTTGGCTTCTTTAATAGGGTAATAATTTC 1655 Query 684775 TATCAATAACATTATTAAGATTTCTTGTCATAATTCCTGACACTTTCCGTAACATATCAT 684834 | ||||| | |||| |||||||| || |||||| || | || ||| | | | Sbjct 1654 TTTCAATTATTTTATCTAGATTTCTAGTAATAATTTTTGTAATTTCATATAATTTTTTAA 1595 Query 684835 AATCGAATTCTGGTACT-CCATTTTTATGTATTATGAATCTGGGAAGACATATTGATGAC 684893 ||| |||||| | | ||| | | ||| || || ||| ||| || | Sbjct 1594 AATTAAATTCTTTTTTTTCCAAGTCCACAAATT-TGCATA----AAGCAATA--GAAGCA 1542 Query 684894 AAATTACAAGTGGCATATTCATCCGCTGATGAGTATTCTACAATTTCCGAACAAAGATTT 684953 | |||||| ||| |||||| | ||| | || || | |||||| |||| | ||| Sbjct 1541 AGATTACATACAGCAACTTCATCAGGTGAAGTATACTCAATAATTTCACAACACAAATTA 1482 Query 684954 GATCCATTAATAACGCCAACATTAATTTGATTGGACTTATAATTAACAGCATCTTTAAAA 685013 | || ||| || | ||| ||||||| || ||| |||| | |||||| | Sbjct 1481 CTACATTTGATAGTACCTAGATTTTTTTGATTCGATTTAGCATTACATGAGTCTTTATAT 1422 Query 685014 ACAATATATGGTACTCCGGTTTCAATTTGTGTTTCCATAATTTTAAACCATAAATCACGA 685073 | |||||||| || || ||||||||||| ||| | || |||||||||||| | Sbjct 1421 AACATATATGGAACACCTGTTTCAATTTGACTTTGTAATATAGCAAACCATAAATCTTGT 1362 Query 685074 GCAGATA----TTTGTTTCATATATTTACCTGATTTTTCATAACTCAAATATGTTTCATT 685129 || ||| ||| || | |||||| | || |||||| | | |||| || | Sbjct 1361 GCTAATACAGTTTTTTTGCCCATATTTTC----TTCTTCATACTTAACATATAATTTTTC 1306 Query 685130 AAATTCAGTACCATATTTACCAACAATATTTGGACATTCAGATGGACACATCAAGGACCA 685189 |||||| ||| || | || | ||| |||||| ||||||||| || | ||| Sbjct 1305 AAATTCTTCACCCCATGTTTCACTTAGTCCTGGGCATTCATTTGGACACATTAAAGTCCA 1246 Query 685190 TACTCCATCTTCTCGTACTCGCTCAATAAATATATCATTNNNNNNNNNNNCTAAAAACAA 685249 | || |||| ||||| | || || | ||| | ||||||| Sbjct 1245 ATTTTGATTTTCTTTTACTCTTTTCATGAACAAGTCAGGAACCCAAACAGCATAAAACAA 1186 Query 685250 ATCTCTGGCTCTTTCAGTTTCCGCTCCTGTAttttttttAAGATCGAGGAAAAAAT---A 685306 |||||| |||||| ||| || ||||||| | | ||| | |||| | | Sbjct 1185 ATCTCTTGCTCTTAATTCTTCTTTGCCATGATTTTTTCTTAAATCTA---AAAATTCGAA 1129 Query 685307 AATATCTGCATGCCAAGGTTCAATATAAATAGCAAATGAACCAGCTCTTTTGCCTCCT-- 685364 ||||||| |||||| ||||||||||||| |||||| ||||| |||||| |||||| Sbjct 1128 TATATCTGAATGCCATGGTTCAATATAAACAGCAAAAGAACCTTTTCTTTTTCCTCCTCC 1069 Query 685365 -TGATTGGCATACCTCGATATATTATTAAATACAGTTAATACTCGTA---GACCACTTGC 685420 |||| |||| || | | ||| |||||| || |||| | ||| | ||| ||| Sbjct 1068 TTGATCTACATATCTAGCTGTATCATTAAAAACTCTTAACATAGGTACGAGTCCATTTGA 1009 Query 685421 TGTGCCTTGTGTAGAATTAATATAAGATCCATCCGCCCTAATATTTGAAACATTTACACC 685480 | || | ||| ||||||| || | | || |||| | || |||||| Sbjct 1008 AATTCCATTCGTACCTCTAATATACGAATTTTGTCCTCTTATATCTTGTACTGCTACACC 949 Query 685481 AATTCCACCAGCATATTTACTAATCATAGCACAATCTTTCCAACAATCACCAATTGCTCC 685540 || |||||||| ||||||||| | |||||| | ||| || || || | Sbjct 948 TATACCACCAGCTGTTTTACTAATAAGAGCACACTGTTTTAGTGTTTCGAATATACCTTC 889 Query 685541 CATATCATCT---TTTATTCCTAAAAGGAAACAGCTTGATAATTGTTCATGAGTAGTTCC 685597 || |||| || || |||||| ||||| || | ||| || ||| || Sbjct 888 TATTGAATCTGATTTCATAGATAAAAGAAAACAAGACGACATTTGGGGTCTAGGAGTACC 829 Query 685598 AGCATTAAATAATGTTGGTGTTGCATGAGTAAAATAACCCTGTGACAACATTTCATAAGT 685657 || |||||||||||||||||| |||||||| ||||| || |||| || | |||||| Sbjct 828 AGAATTAAATAATGTTGGTGTAGCATGAGTGAAATATTTTTGAGACATCAAATGATAAGT 769 Query 685658 TTCAAATATTCTGTTTAGATCATTATTACGATAATGTATAGCAATTGCTACACGCATAAA 685717 ||| ||| | | | || ||||| | | ||||||| | || | ||| | ||| || Sbjct 768 TTCTAATGCTTTATCTATATCATCAAT------ATGTATACCTATCGATACTCTCATTAA 715 Query 685718 TAAATGTTGAGGTCTTTCTATGATT 685742 ||||||||| |||||||| || ||| Sbjct 714 TAAATGTTGTGGTCTTTCAATAATT 690 >seq3920 Length=5462 Score = 172 bits (190), Expect = 4e-37 Identities = 331/488 (68%), Gaps = 15/488 (3%) Strand=Plus/Minus Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 ||||||| || |||||||| || ||||| | ||||| || || |||| || | || | Sbjct 2424 AAAGTGTGAACCCAGATGAAGCAGTTGCTTTAGGTGCAGCTATACAAGGAGGTGTTTT-- 2367 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||| || |||| || || || | | ||| ||||||||| |||| |||| Sbjct 2366 ------AAAAGGA-GAAA---TAAAAGATTTACTTCTTTTAGATGTTATTCCTTTATCAT 2317 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| ||||||| | || ||| | | ||||| | || |||||||||| || || | Sbjct 2316 TAGGTATAGAAACTTTAGGTGGTGTATTTACTAAATTAATTAATAGAAATACAACAATCC 2257 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | || ||||| | ||||||| || | | ||||| ||||| |||| ||| Sbjct 2256 CAACAAAGAAATCGCAAATATTTTCCACAGCTGCCGATAACCAAACACAAGTTAGTATTA 2197 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || ||| | ||||||||||| || | ||| |||||||| | || ||||| ||| Sbjct 2196 AAGTTTATCAAGGAGAAAGAGAAATGGCTAGTGATAATAAAATGTTAGGCTCTTTTGATT 2137 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 ||| |||||||| ||||| ||| | || || || |||||||||||||| |||||| | | Sbjct 2136 TAGTTGGTATTCCACCTGCACCTAGAGGTGTTCCACAAATTGAAGTTACATTCGATGTTG 2077 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATA 552621 |||| |||| |||| | || | | ||| ||||||| | || || | || | | Sbjct 2076 ATGCTAATGCAATTATTAACATATCCGCTATTGATAAAATGACAAATAAAAAACAACAAA 2017 Query 552622 TTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACGTATGGTCGAAG 552681 ||||| | | | ||||| | || | | | ||| ||||| || ||||| ||| Sbjct 2016 TTACT---ATTCAAAGTAGTGGTGGTTTGAGTAAAGAAGAAATTGAAAAGATGGTTCAAG 1960 Query 552682 AAGCTAAA 552689 ||||| || Sbjct 1959 AAGCTGAA 1952 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATT-TTAATAACATTGAGTCCCGC 361764 ||| | ||||| | ||| ||||||||||||||||| ||| ||||| |||| | || || Sbjct 2958 CCAAATGCTAAAGCAGCTGCTGTTGGTTCGTTAATAATTCTTAAT-ACATCTAAACCTGC 3016 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| ||||||| || ||||| | ||| | ||||||||||||||| || || || Sbjct 3017 AATTTTACCTGCATCTTTTGTTGCTTGTCTTTGAGAATCATTAAAATATGCTGGTACTGT 3076 Query 361825 AATCACTGCTT 361835 ||| || |||| Sbjct 3077 AATAACAGCTT 3087 >seq1394 Length=7918 Score = 147 bits (162), Expect = 2e-29 Identities = 350/518 (68%), Gaps = 21/518 (4%) Strand=Plus/Plus Query 428095 TGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGC 428154 |||||| || ||||| |||||||| |||||| || || || |||| || || ||| Sbjct 4486 TGAATATCCTGTTCCTATTCCTTCACAACCATTCACCAGTATAGTTGGTATAACAGGTAT 4545 Query 428155 ATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAA---TGTAAAATATCAAA 428211 ||||||||||||||| ||||| | | |||| | | |||| | ||| ||| | Sbjct 4546 ATAATATTGTGGTTC---TATTTTTTGACCTTCTTCGTTTAAATATTTTAATATAGGATC 4602 Query 428212 ATCATGCTCGATAAATAt-ttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTG 428270 ||||| || ||||||| || || | || | ||| ||| ||||| ||||| || | Sbjct 4603 ATCATATTCATTAAATATACTTCTTGTCGAACTAGCCAATTTG-GTAAAAATATACCTAG 4661 Query 428271 CGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATA 428330 | || | |||||| ||||| ||||| | |||||||||||| || || | Sbjct 4662 CTGCTGATGCATCTTTTCCTCCCTCTTTTCTACTACCAAATTGTCCACATGGTTCTAAAA 4721 Query 428331 AATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGT-TAAG 428389 | ||||||||||| ||| ||| | |||| ||||| |||| |||||| || | ||| Sbjct 4722 AGTTAATATTATTTGATCCTACAAATGTTTGTGCCATGTTAATAATGGT-CTGTTGTAAT 4780 Query 428390 GATTGTTCACCATGATGATAT----TTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGA 428445 || || |||||||||||| | | ||| | | | | || | ||||| || Sbjct 4781 GAAGACTCTCCATGATGATATGCACTATGCTCTGCTATATA-TCCAAC---TAATTGTGC 4836 Query 428446 TACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTG 428505 ||| || ||| | ||| ||||| ||| | || | ||||| | |||||| | ||| Sbjct 4837 TACTTTACATTCAT-TTTTTAAATTTCTTTTAAAAC--AGCCATATAGTACTTTTCTTTG 4893 Query 428506 TGATGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGAA 428565 ||||| ||||||||||||| || |||||| |||| |||||| ||| | Sbjct 4894 ACCAGGTTTCCATCCATCCATAATGTTCGGTATACTTCTTTCTGTATCATATCTTGAATA 4953 Query 428566 TGATATTAGTTCTTGATGAATGAAATCATAATATGATA 428603 | |||| ||||| || | ||||| |||||||||| Sbjct 4954 ATAAATTAATTCTTTATTTACAAAATCGTAATATGATA 4991 Score = 109 bits (120), Expect = 4e-18 Identities = 220/321 (69%), Gaps = 28/321 (9%) Strand=Plus/Plus Query 430244 ATATTCGCTAATTTTGCTCCGAATCCATTTTTACCACCAACAAtttttttttCACCTTTA 430303 ||||| | |||||||||||| ||||||||| | || ||| |||| | ||| | | | Sbjct 6716 ATATTTGTTAATTTTGCTCCAAATCCATTTCTGCCTCCAGTAATTCGATCTTCTGCATCA 6775 Query 430304 TCATAATTAGTGGATGTTAATAGTTCTCCAAAAATCATCGATG-GTACCAT-GATTTTAT 430361 ||||||||| |||||||| | ||| ||||||||||| ||| | | ||| || || Sbjct 6776 TCATAATTATCCGATGTTAACAATTCCCCAAAAATCAT--ATGAGGAACATATATATTCA 6833 Query 430362 GTTCTTTATGCTCGACGACATCAATACCATCACCATTATTCCAAACACTAATTTCTCCAG 430421 ||||||||| | || ||||| ||||||| ||| | ||||| |||| | Sbjct 6834 TTTCTTTATGTATTTCTACTGGTATACCTTCACCATCATTATATACACTTATTTTTTTCT 6893 Query 430422 ATTCTTCATTGATGTCGACTTTTA------TCATA------TTAC----ATGATTTGC-- 430463 ||||| ||| || || | ||||| ||||| | || | ||| | Sbjct 6894 GTTCTTTATTTATTTCTATTTTTATACAAGTCATAGGGTTGTCACTCTTCGGCTTTTCCC 6953 Query 430464 -ATCTTTTACTATGATCCGCTGAATTTACAAGAACTTCATCATATATTTTATAAAGTCCT 430522 | ||||||| ||| |||| |||||||| || |||||| |||||||||| | ||| Sbjct 6954 TAGCTTTTAC----ATCTGCTGCATTTACAATAATTTCATCGAATATTTTATATAACCCT 7009 Query 430523 GGTACATAAGATAT-TTCTTT 430542 |||||||| | ||| |||||| Sbjct 7010 GGTACATATGTTATATTCTTT 7030 >seq3356 Length=7745 Score = 129 bits (142), Expect = 5e-24 Identities = 369/552 (67%), Gaps = 39/552 (7%) Strand=Plus/Plus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 |||||||||||| || | |||| |||||| || ||| | ||| | ||| | ||| Sbjct 3788 GATTGGTGTATTAGTAGGAACAGGTATTGGGGTACACCATTACCATTGTGG---TGTGAC 3844 Query 368644 GAT--GGTGAAGAA-ATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGT 368700 || | || | | ||| | ||||| || || || |||| |||| |||||||| Sbjct 3845 GAAAAGATGGAAACGATTATATGTATTGGAAGTATAAAGCAATTAGAAGAGTTATCTGGA 3904 Query 368701 GTGCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATT--CCATCAA 368758 || |||| |||| ||||||||||| || | || ||| | ||| ||||| ||| | Sbjct 3905 GTAAAAAACATTACTGATTTACATAGACATCATATAGATAAGATTGAAATTGATAATCCA 3964 Query 368759 AGAAAGGAAAAGGTTT------ATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTG 368812 |||||||| ||| | || || | | || ||| || || || ||||||| Sbjct 3965 --AAAGGAAAGCATTTACCAAAACTGAAGAGAATAGCAGAAGTATTTGACTGTTGGTTTG 4022 Query 368813 AATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGATAACGCAAAATACTTTG 368872 || ||||||||||| | || || | || ||||||||| || ||||| | | Sbjct 4023 AAAGTGGTTCTATGCCCTTTGCAAAAGTTCACTATCCATTTAGTA---CAAAAAA---AG 4076 Query 368873 ATAAT---GATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTG 368929 | | | || ||| || | ||||||||| | ||||| | | |||||||| | | Sbjct 4077 AAAGTCTAGAAAAAATTTTTCCAGCTGATTTTATTGCAGAAGGATTAGATCAAACGAGGG 4136 Query 368930 GTTGGTTTTATACCCTATTAGTATTATCCACAGCTATT-TTCGATAAACCGGCTTTTAAA 368988 | ||||| ||||| || || || || ||| ||||| || |||||| | ||| ||| Sbjct 4137 GATGGTTCTATACTCTTTTGGTTGTAAGCAC-TCTATTATTTGATAAAGCTCCTTACAAA 4195 Query 368989 AATGTAATA-GTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGAT--GTCAAAAAGT 369045 ||| ||||| ||||| ||| ||||| ||||| ||||| |||| || || ||| | | Sbjct 4196 AATTTAATATGTAAC-GGTCTTGTTCTAGCATCAGATGGGAAAAAAATGAGTAAAAGATT 4254 Query 369046 AAGGGTAATTATTCCGATCC---TAATATTTTAATTGATAAATTTGGTGCTGATACTTTG 369102 || |||||| | ||||| | ||||| || |||||| ||| || || | ||| Sbjct 4255 AA--AAAATTATCCTGATCCCGTTTATATT---CTTAATAAATATGGAGCGGACAGCTTG 4309 Query 369103 AGATTATACCTA 369114 ||| | ||| || Sbjct 4310 AGACTGTACTTA 4321 Score = 118 bits (130), Expect = 9e-21 Identities = 309/458 (67%), Gaps = 24/458 (5%) Strand=Plus/Plus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 ||||| ||||||||||| ||||| ||| | || ||||||||| ||| || || || Sbjct 2300 GATGGTCCTCCATTTGCTACAGGACTACCA--CACTATGGTCAT---TTACTAGCAGGTA 2354 Query 367325 TTAAAGACACCATAATTAGATATTTTACCATGA--AGGGTTACAAA---GTTGATAGAAG 367379 | || | | || | || | ||| || | || || || | ||||| ||||| Sbjct 2355 T--AATAAAAGATTGTGTGACAAGATACAATTATCAGTGTAACTATTATGTTGAAAGAAG 2412 Query 367380 AAATTCTTGGGATTGTCATGGAGTTCCAATTGAA-ATGT--TAGCTAAA-AAAGTAATCG 367435 | | ||||| || ||||| | || |||||| ||| ||| ||| ||| |||| Sbjct 2413 ATTTGGATGGGACTGCCATGGGTTACCTATTGAATATGAAATAGAAAAAGAAAATAAT-- 2470 Query 367436 GATACACAACAAAGAAAGAATTATATGATTATGGAATTAATAATCATAATGATATTTGTC 367495 ||| | || ||||| || ||| | | || || || ||||||| | |||| Sbjct 2471 -ATAAATAAAAAAGAGGATATCATAAAAATG-GGTATAGATGTATATAATGAAAAATGTC 2528 Query 367496 GTAATTTGGTTTTAAAATGTGCTGATCGCTGGTATCAAGATTTT-GAACGTATTGGAAGA 367554 | ||| | |||||||||| | | || ||| || || | | | ||| | || |||||| Sbjct 2529 GAAATATAGTTTTAAAATATTCAAATGAATGG-ATAAAAACTGTAGAAAGAATAGGAAGA 2587 Query 367555 TGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATT 367614 |||||||| | |||||||| |||||||| |||||||||| ||| |||||| |||| Sbjct 2588 TGGATTGATTTTAAAAATGATTATAAAACTATGGATACTACTTTTATGGAAAGTGTTTGG 2647 Query 367615 TGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCA 367674 |||| |||| ||||||| || | || | || | | || || |||||| |||||| Sbjct 2648 TGGGTTTTTAGTGAATTATATAAAAGAGGCTTTATATATAAATCTTTTAAAGTTATGCCA 2707 Query 367675 TATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGA 367712 ||||| | |||||||| | | || ||||||| Sbjct 2708 TATTCTTGTAAATGTAATACACCCATATCTAATTTTGA 2745 >seq1654 Length=3355 Score = 116 bits (128), Expect = 3e-20 Identities = 131/172 (76%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 ||||||||||||| |||||||| ||||||||||||||| | || ||||| | || || | Sbjct 1421 TTGATTTTTCTTCTCCAAATATAGCCAAAGAAATGCATGTAGGTCATTTAAGATCAACTA 1480 Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTC--ATCGAGT 930781 | || || || | |||||||| | | || | || | | || || | | | || | Sbjct 1481 TAATAGGTGATAGTATATGTAGAATTTTCGAGT-TTTTAAATGTTAA-TACGAAAAGAAT 1538 Query 930782 CAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATATA 930833 |||||||||||||||||||||||||||||||| ||| |||| ||||||| Sbjct 1539 AAATCATATTGGTGATTGGGGAACACAATTTGGAATGATAATAAATTATATA 1590 >seq32 Length=4364 Score = 104 bits (114), Expect = 2e-16 Identities = 292/446 (65%), Gaps = 28/446 (6%) Strand=Plus/Minus Query 1047049 GCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGAGAT 1047108 || ||||||||||| || | ||| | |||||| ||| || || ||||||| | | | Sbjct 2109 GCCGATTGGTTTGCTCAGTTAAATAACAAAATGTCAGGGGACTTGAAAAAAATAAAAAAA 2050 Query 1047109 GTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGT--CTGGCACTA 1047166 || || || || || |||||||| | ||| |||||||| |||||| | | || Sbjct 2049 GTAGGAAATTACTTTATTGAAGTTTGGAAAAGCTGTGGTATGAATATGGAACATGTAC-- 1992 Query 1047167 AATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATGT 1047226 ||||| | |||||||| || | || | || || | | |||| | | Sbjct 1991 AATTTTTGTGGGCTAGCGATGAAATAAACAAAAAAGCAAATGAGTATTGGTCA------T 1938 Query 1047227 TACATATTGCTA-ATCAGACATCTTTAGCAC-----GTGCTAAAAGATGTTGTCAAATTA 1047280 || ||||| || ||| | | ||||| | | |||||||||| |||| | Sbjct 1937 TAGTTATTGATATATCGAAAAGCTTTAATATTAATAGAATAAAAAGATGTTTAAAAATAA 1878 Query 1047281 TGGGACGTAGAGAAGGTGATGAATTATCTTCGTCACAAATTATATATCCTTGTATGCAAG 1047340 |||| | || ||||| || ||| | || ||||||||| |||| || ||||||||| Sbjct 1877 TGGGTAGAAGTGAAGGAGAAGAAAATTATTGTTCACAAATTTTATACCCATGTATGCAAT 1818 Query 1047341 TAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTGATC 1047400 || ||||| ||| |||||| ||||||| ||||| | || |||| Sbjct 1817 GTGCTGATATATTTTTTTTAAATG---------TTGATATCTGTCAGTTAGGCACAGATC 1767 Query 1047401 AAAGAAAAGTTAATATGTTAGCCATTGAATATGCTAAACGTAATAATTT---AAAAACAC 1047457 | |||||||| ||||||||||| |||||| | | ||| || | ||||| || Sbjct 1766 AGAGAAAAGTAAATATGTTAGCACGAGAATATTGTGATATTAAAAAAATAAAAAAAAAAC 1707 Query 1047458 CAATTATTTTATCTCACCATATGTTA 1047483 | ||||||||||| || | |||||| Sbjct 1706 CTATTATTTTATCACATGAAATGTTA 1681 >seq574 Length=9036 Score = 102 bits (112), Expect = 7e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 || |||| || ||||||| | ||||||| | | ||| | ||||| || || | | Sbjct 4322 ATTCCATCTTCTCCATATAAAAATTGAATAATATCACCATATGAGTTTCTGACAGTTCGA 4263 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||| | ||| ||| || || | ||||| ||| | ||||| ||||||||||| Sbjct 4262 TCATATTGTACCATAACATCCTCCATAGCTTTAATTAACCTCCTTTGTATATAACCAGTT 4203 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 || | |||||| |||||| | |||||||||||||| || ||||| | ||||||||| Sbjct 4202 TCGGATGTTTTACATGCAGTGTCTATAATACCTTCTCTACCACCCATAGCATGGAAGAAA 4143 Query 390991 AATTCC 390996 | |||| Sbjct 4142 ACTTCC 4137 >seq1821 Length=1654 Score = 95.1 bits (104), Expect = 1e-13 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 563272 TGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTT 563329 || ||||| ||| | |||| ||| |||||||| | | |||||| |||||| | || Sbjct 404 TGTAGGGTTGACTCTTTTTG--AATGTTGTAATCCGACAATGTTCTTCCATCTTCTAATT 461 Query 563330 GTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTT 563389 ||||||| ||||| || | ||| || |||||||| ||||||||||| || ||||| |||| Sbjct 462 GTTTTCCCGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGTATTT 521 Query 563390 TTTGTTTTACTGCCTCAATTGTATC 563414 | || || |||||| ||||| Sbjct 522 TAGCCTTAACATTCTCAATAGTATC 546 >seq1150 Length=9684 Score = 91.5 bits (100), Expect = 1e-12 Identities = 192/280 (69%), Gaps = 10/280 (4%) Strand=Plus/Plus Query 390889 TCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTGTCTGCAGTTTTAATTGCA 390948 |||||||| ||| | |||| ||||||| || || ||||| || ||||| || | ||| Sbjct 6348 TCTTCTAAAGCTTTCATTAATCTTCTTTGCATGTACCCAGTTTCGGCAGTCTTCACAGCA 6407 Query 390949 GTATTAA-TAATACCTTCTCTTCCTGCCATAACTTGGAAGAAAAATTCCATAGGATTGAG 391007 || | | |||| |||||||| || | ||| || || || ||||| | |||||||| Sbjct 6408 GTGTCGACTAAT-CCTTCTCTACCAGACATGGTATGAAAAAAGAATTCGGTTGGATTGAG 6466 Query 391008 TCCAG-AAATAAATGATCCAAAACAAAATCCT---CTTGCAGAAGGACTATCATCATGTT 391063 ||||| | | ||| || ||| ||||||| ||| ||||| || || | | Sbjct 6467 TCCAGTATAGAAAGAATTTTGAAC-AAATCCTCTACTTTCAGAATCTTTACAATGAAAAT 6525 Query 391064 GTGCAAACATAGGTAATGTTCTATTATTAAATCTTTTTTGAATTCGTTTATCTTCGACAA 391123 | ||| ||||||||||||||| |||||| ||||| |||| || | | | ||| Sbjct 6526 G---AAAATGGGGTAATGTTCTATTAATAAATCCATTTTGTATTCTTTGACCAGCTACAT 6582 Query 391124 TAACTTGTCCAATACATCCTGCAATCTGTGCAGCATTCAT 391163 | |||||||| ||| || || |||||| ||| || Sbjct 6583 TTTGTTGTCCAACACACGCTATCATTTGTGCAATATTAAT 6622 >seq291 Length=4955 Score = 91.5 bits (100), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 399564 ATATAATATGACAAGGAGGTAATGCCAtttttttAATGTCGACAGGATTCCATAAACTTA 399623 ||| ||||||||||||||||| |||||||| | || || | ||||||| || | Sbjct 4146 ATAAAATATGACAAGGAGGTAGTGCCATTTGATCAAGATCTTTAACATTCCATGCACACA 4087 Query 399624 TAATTATTCTGCGATCATTTGGATTATTCATAATAGCATCAATACAATTATTTAATTGAT 399683 ||| ||||| | | | |||||| ||| | || || ||| ||| |||||||||| Sbjct 4086 AAATAATTCTTCTACTAGTTGGATCATTTTTTATTAAATGGATAATATTTTTTAATTGAT 4027 Query 399684 CAATTCCTTGATCATGATAATCTGTTTTACA-ATTATCATATTTGGCTCCGAAATGTCTC 399742 ||| ||||| ||| | ||| | || | || ||| ||||| || |||||||| ||| Sbjct 4026 CAACTCCTTTATCTTCATAGT-TGGCATGCATATTTGTATATTCAGCACCGAAATGCCTC 3968 Query 399743 ATTTGAAATCCATA 399756 |||||| ||||| Sbjct 3967 CATTGAAAACCATA 3954 >seq162 Length=1991 Score = 89.7 bits (98), Expect = 4e-12 Identities = 176/258 (68%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 722921 TGCCATGGATTGAAAAATATAGACCCAGAAAGCTAAAAGATTTTGTACAATCACAAAATT 722980 |||||||| | ||||| || ||||||| ||||||| | || | || || | |||| Sbjct 45 TGCCATGGGTGGAAAAGTACAGACCCAAAAAGCTAGATGACATAGTTCACCAAACAAATG 104 Query 722981 TAATAAACTTATTTAAAAA--TAGTACCGCCAAAGGAGAAATGACACATTTTTTATTTTA 723038 |||| | | ||| | ||||| |||| | | ||| | ||||| | || | Sbjct 105 CAATATCTATGCTGAAAGAAGTAGTAAGAACAAA--AAATATGCCTCATTTAATTTTCCA 162 Query 723039 TGGACCTCCTGGTACCGGAAAAACATCGGTAATATTAGCAATGGGTAGAGAAATATTT-- 723096 ||| || ||||| || || |||||||| | |||| ||| | | ||| ||||| Sbjct 163 TGGCCCACCTGGAACAGGCAAAACATCAGCAATAAATGCATTAGCACATGAACTATTTGG 222 Query 723097 -AAAGAACATTTTACCACACGAGTAATTGAATTTAATGCTTCAGATGATAGAGGTATTAA 723155 || || || | | ||| ||| | ||||| ||||| ||||||||||||||||| || Sbjct 223 TAAGGATAATATAAGTGAACGTGTATTAGAATTGAATGCATCAGATGATAGAGGTATAAA 282 Query 723156 TGCCGTAAGAGAAAAAAT 723173 | |||||||||||||| Sbjct 283 CGTAGTAAGAGAAAAAAT 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028911529612300