Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1378 91.5 2e-13 >seq1378 Length=4202 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 ||| ||| | ||||| | ||||||| ||||| ||| |||| | ||||||| | | | Sbjct 1588 TTTAATTTTAAAAAATTATATGAAATTACAAAAATTATTACTAGAAATCTAGATAAAATA 1647 Query 76154 ATTGACAGAAATTTTTATCCCGTTGA-GACTGCGCGAAAGT--CTAATATGCGACACAGA 76210 ||||| ||||||| ||| || || | || || ||||| |||| | | | || ||| Sbjct 1648 ATTGAAAGAAATTATTACCCTATTAAAGAA---GCCAAAGTGTCTAACAAGAGGCATAGA 1704 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTT 76270 ||||| ||| | |||||||| || | || ||| ||||| | | | || | | | Sbjct 1705 CCTATAGGTATAGGTGTTCAGGGGTTAGCAGATACTTTTATGCTTTTGAGATATCCCTAT 1764 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTA 76320 || || |||||||| || ||| ||||| | || || ||||||||||| Sbjct 1765 GAGTCGGATGAAGCTAAAGAGTTGAATAGAAGAATATTCGAAACCATGTA 1814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596515386737600