Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq260 538 5e-148 seq1378 226 4e-54 seq428 185 1e-41 seq1821 129 8e-25 seq3920 114 2e-20 seq1502 107 3e-18 >seq260 Length=2304 Score = 538 bits (596), Expect = 5e-148 Identities = 1109/1632 (68%), Gaps = 23/1632 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || ||||||||||| || ||||| || ||||||||||||||||||||| |||||| Sbjct 156 GCCATTGGTATCGACTTGGGAACAACGTACTCATGTGTTGGTGTATGGAGAAATGAAAAC 215 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || || || ||||| | ||||| |||||||| ||||||||||| Sbjct 216 GTGGACATTATAGCAAACGATCAGGGAAATAGAACAACCCCATCGTATGTTGCCTTTACT 275 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || | || | |||||||| ||||| || || |||| ||| || ||| Sbjct 276 GATACAGAGAGACTAATAGGAGATGCAGCAAAGAACCAAGTTGCTAGGAATCCGGAAAAT 335 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 ||||| ||||| || ||| | | ||||| | || ||| | || || ||| Sbjct 336 ACTGTATTTGATGCAAAGAGATTAATTGGAAGGAAATTTACAGAATCATCTGTGCAAAGT 395 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| ||| | ||| | | | ||| | ||||| | ||| || || |||||| | Sbjct 396 GATATGAAGCATTGGCCATTTACAGTAAAGTCAGGTGTAGATGAGAAACCAATGATTGAA 455 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 ||| || || || || |||||| |||| ||||||||||||||| || ||||| || Sbjct 456 GTTACATACCAAGGGGAAAAGAAATTATTTCATCCCGAAGAAATTTCATCAATGGTTTTA 515 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||||||| || | ||| ||| | || | |||||| | | || |||| || | Sbjct 516 CAAAAGATGAAAGAAAATGCAGAAGCATTTTTAGGTAAATCCATAAAGAATGCTGTAATT 575 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 |||||||| || || || | ||||| ||| |||| || ||||| || || | | | ||| Sbjct 576 ACTGTACCAGCATATTTTAACGATTCTCAAAGACAAGCAACAAAAGATGCAGGTACCATT 635 Query 195779 GCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || | || ||| | |||||||| ||||||||||| || || ||||| || ||||| Sbjct 636 GCTGGATTGAA-TGTAATGAGAATTATTAATGAACCAACTGCAGCAGCAATAGCATATGG 694 Query 195838 TCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || |||| | | || |||||| | || || || ||| | || || ||| Sbjct 695 TTT--ACATAAAAAAGGAAAGGGGGAAAAAAATATTTTAATTTTCGATTTAGGAGGAGGT 752 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| || | | | ||||||| ||||||||||||||| || || || || Sbjct 753 ACATTTGATGTATCTTTGTTAACAATTGAAGATGGTATATTCGAAGTGAAAGCAACAGCA 812 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT--- 196012 || ||||| || |||||||||||||||| ||| | || | | |||| | | Sbjct 813 GGAGATACACACTTAGGTGGTGAAGATTTTGATAACAGACTAGT---TAATTTCTGTGTA 869 Query 196013 GATGAGTTCCGTCGAAAGAATAAG---AAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 || || || |||| |||| | |||||| | || |||| ||| || | | Sbjct 870 GAAGATTTTAAGAGAAAAAATAGGGGTAAAGATTTATCAAAAAATAGTAGAGCATTAAGA 929 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129 || | || || ||||||| | |||||||| || | || || | | ||| | | Sbjct 930 AGGTTAAGAACACAATGTGAAAGGGCCAAACGTACGTTGTCATCCTCTACACAAGCTACC 989 Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACG 196188 | || |||||||| | ||||| || || || || || | ||| | | | ||| | Sbjct 990 ATCGAAATTGATTCCCTTTTTGAAGGTATAGA-TTATAGTGTAACAGTAAGTAGAGCAAG 1048 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 |||||||||||| ||| | || ||| | | | ||| || || |||| | Sbjct 1049 ATTTGAAGAGTTATGTATTGACTATTTCAGGGATACGTTAGTACCAGTAGAGAAAGTCTT 1108 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 || || | ||||||||| | || ||||| |||| | || || || ||||| Sbjct 1109 AAAAGATGCTATGATGGATAAAAAAAGTGTACATGAAGTTGTTTTAGTTGGTGGTTCAAC 1168 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACA 196367 || ||||| ||||| ||| | || | || || || || ||||| | | Sbjct 1169 ACGAATTCCTAAGATACAA-ACATTAATCAAAGAATTTTTTAACGGCAAAGAAGCATGTA 1227 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | | || ||||| |||||||| || || |||||||| || || || || || || | | Sbjct 1228 GATCTATTAACCCAGATGAAGCTGTAGCATATGGTGCAGCAGTACAAGCAGCAATATTAT 1287 Query 196428 CAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGT-TGCACCCGTATCC 196486 | |||| | | ||| || |||||| | || || | ||||| ||| || ||||| Sbjct 1288 CGGGTGATCAGTCCAATGCTGTTCAAGATTTATTGTTATTAGATGTATGC-TCCTTATCC 1346 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 | ||| | ||||| || |||||||||||||| ||| | ||||| || || ||||||||| Sbjct 1347 TTAGGTTTAGAAACTGCTGGTGGTGTTATGACAAAATTGATTGAAAGAAATACAACTATT 1406 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 || | || || ||| ||||| | |||||| | ||||| ||||||||||| || Sbjct 1407 CCAGCAAAAAAAAGTCAAATCTTTACGACGTATGCTGATAACCAACCAGGTGTGTTAATC 1466 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGA 196665 |||||||||||||||||| | | |||| ||||| || | | || || |||| | Sbjct 1467 CAAGTATATGAAGGAGAAAGAGCATTAACAAAAGATAATAATTTGTTAGGTAAATTTC-A 1525 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 ||| || || ||| |||| || || || ||||| ||| | ||| || ||||| Sbjct 1526 TTTAGATGGTATACCACCTGCCCCTAGGAAAGTACCACAAATTGAAGTTACGTTTGATAT 1585 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 ||| |||||||||||| |||| || ||||||| || ||| | || ||| | | Sbjct 1586 AGATGCAAATGGAATTTTAAATGTTACAGCTGTTGAGAAGAGCACGGGAAAACAAAATCA 1645 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 ||| ||||||||||| ||||| || | || || |||||||| ||||||||| | Sbjct 1646 TATTACTATTACCAATGATAAGGGTAGGTTATCCCCTGAAGAAATTGATCGTATGGTTAA 1705 Query 196846 AGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAA 196905 ||||| ||||| || | | ||| || || | || ||||| || |||| | ||| Sbjct 1706 TGATGCAGAAAAATATAAAGCAGAGGATGAAGAGAATAAGAAAAGAATTGAAGCAAGAAA 1765 Query 196906 TGATCTAGAAAA 196917 | ||||||||| Sbjct 1766 TAGTCTAGAAAA 1777 >seq1378 Length=4202 Score = 226 bits (250), Expect = 4e-54 Identities = 1107/1727 (64%), Gaps = 56/1727 (3%) Strand=Plus/Plus Query 77866 ACGTGACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTA 77925 |||||| ||| | | || ||||||||||| ||||| | |||| | ||| | | || Sbjct 618 ACGTGATTTTAATTATGATTATTTTGGATTTAAGACATTAGAAAGATCTTATTT--ATTA 675 Query 77926 C--ATGGATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGT 77983 | || | || | || || | ||| ||| | ||||| ||| | || || || ||| Sbjct 676 CGTATTAACAACAAAATTATTGAAAGACCACAACATTTATTAATGAGAGTATCGATAGGT 735 Query 77984 ATTCATGGAAATGATAT---TCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGG 78039 || ||| ||||||| | ||| || ||||| ||| || ||||| ||| Sbjct 736 ATACATATTGATGATATAGATAAAGCATTA---GAAACTTATCATTTGATGTCTCAAAAA 792 Query 78040 TATGTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTC 78099 ||| || | ||| || ||||| || || |||||| | |||||||| | || || ||||| Sbjct 793 TAT-TTCACTCATGCTACACCAACATTATTTAATTCTGGTACTCCTAGACCCCAAATGTC 851 Query 78100 ATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCAC 78159 |||||||| || | | | || || || || | ||||||| || || || | Sbjct 852 GTCTTGTTTTCTTTTATCTATGAAATCAGATTCAATAGAAGGTATATTCGAAACACTAAA 911 Query 78160 AGAGTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCG 78219 | ||||||||| ||| ||| ||||||||||||||| | | || ||| | | Sbjct 912 ACAGTGTGCTCTTATTAGTAAAACAGCTGGTGGTATAGGTGTAGCAGTACAAGATATAAG 971 Query 78220 TGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCT 78279 | | | || || |||||||| || ||||| || ||||| | | |||||| | Sbjct 972 AGGACAAAATTCGTATATTAGAGGTACGAATGGAATTTCAAATGGACTCGTACCTATGTT 1031 Query 78280 TAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTA---GGAAGGGGTC 78336 || || || |||| |||||| | ||||| | |||| || | | | || || || Sbjct 1032 AAGAGTTTTTAATGATACAGCTAGATATGTAGATCAAGGAGGAGGAAAAAGAAAAGGTTC 1091 Query 78337 ATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCT 78396 || ||| | || ||||||| ||||| | ||| || | || ||||| || | | Sbjct 1092 TTTTGCTGTTTATATTGAACCATGGCATTCAGATATATTCGAATTTTTAGATTTAAGAAA 1151 Query 78397 CAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGA 78456 || || || | || ||| || || ||||| || |||| | ||| |||| || Sbjct 1152 AAATCATGGCAAAGAAGAATTAAGAGCAAGAGATTTGTTTTATGCTGTTTGGGTTCCTGA 1211 Query 78457 TCTTTTTATGAAGAGAGTTGAGGAAGGAGGTAAATGGTCTCTTTTCTGTCCAGAT-AAGA 78515 | || ||||| ||||| | ||| || ||| || | | |||||| || || Sbjct 1212 CTTGTTCATGAAAAGAGTAAAAGAAAATCAAAATTGGACTTTAATGTGTCCAAATGAATG 1271 Query 78516 CTAAGGGTCTTTCAGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAG 78575 | ||| || || || || |||||||| |||||||| || ||| || |||| Sbjct 1272 CCCAGGA-CTAAGTGAAACATGGGGTGAAGAATTTGAAAAATTATATGTTAAGTATGAAG 1330 Query 78576 AGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAA 78635 | ||| | | | | || || | ||| || ||||| ||||| | ||| Sbjct 1331 AAGAAAATATGGGCAAAAAAACTGTATTAGCACAAGATTTATGGTTTGCTATATTACAAA 1390 Query 78636 GTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTA 78695 |||||| || || || || |||||| |||| |||||| ||||| || || | Sbjct 1391 GTCAAATTGAAACAGGTGTTCCATATATGTTATATAAAGACTCATGTAATGCTAAATCGA 1450 Query 78696 ACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACA 78755 | ||||| || |||||| |||||| | ||| | || |||||| | || || | Sbjct 1451 ATCAAAAAAATCTAGGTACTATCAAATGTAGTAATTTGTGTTGTGAAATTATTGAGTATA 1510 Query 78756 CGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTG 78815 | ||||| |||||||||||||| | ||||| ||| || || ||||| | Sbjct 1511 CTTCACCTGATGAAGTTGCTGTATGTAATCTTGCTTCTATTGCTTTATGCAAATTTGTGG 1570 Query 78816 A-TCGAGAATTAAAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACT 78874 | | | || ||||| |||| ||| | ||| | | |||||||||||||| | ||| Sbjct 1571 ACTTGGAAAAAAAAGA-ATTTAATTTTAAAAAATTATATGAAATTACAAAAATTATTACT 1629 Query 78875 AAAAATTTAAATCGTGTAATTGACCGTAACTACTACCC-AGTCGAGACTGCTAAATATTC 78933 | |||| || || ||||||| | || || ||||| | | ||| || ||| || Sbjct 1630 AGAAATCTAGATAAAATAATTGAAAGAAATTATTACCCTATTAAAGA-AGCCAAAGTGTC 1688 Query 78934 TAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGAT-GTATTCAACT 78992 ||| | || |||||||| || ||| |||||||||| || || |||||| | || || Sbjct 1689 TAACAAGAGGCATAGACCTATAGGTATAGGTGTTCAGGGGTTAGCAGATACTTTTATGCT 1748 Query 78993 TGTGTGGTCTTCCCTTCGATTGCGAAGATTC-AAGGACTATGAATGCTCATATTTTCGAG 79051 | || | | ||||| || | || || | || || | ||||| || ||||| Sbjct 1749 TTTGAGAT-ATCCCTATGAGTCGGATGAAGCTAAAGAGT-TGAATAGAAGAATATTCGAA 1806 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCA--GAACTTGCTGAAATTAATGGGCCTT 79109 || || || |||| ||||||||| | || | ||| | || ||| |||| |||| Sbjct 1807 ACCATGTACTATGCTGCTTTAGAA--ATGTCTATGGAATTAGCAATGATTCATGGACCTT 1864 Query 79110 ATGAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAG 79169 |||| || ||||| || ||| |||||| |||| ||| ||| | | |||| Sbjct 1865 ATGAATCTTATCAGGGTAGTCCAGCTAGTCAAGGTATTCTACAATTTGATATGT-GGAAT 1923 Query 79170 GTGAAGCTAAATA--CAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGAC 79227 ||| || ||| ||| | | ||||||||| | | ||||| | || || Sbjct 1924 AAAAAGGTAGATAGTAAGTACTGG----AATTGGGATGAACT---AAAGC-TCAAAATAC 1975 Query 79228 G----AAGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTC 79283 | | ||| | || || | | || | ||||| ||||| |||||||| || ||| Sbjct 1976 GTAAACATGGTTTAAGGAATTCTTTACTACTTGCACCTATGCCAACTGCTTCTACATCTC 2035 Query 79284 AGATCCTCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCA 79343 | || || || ||||| || | |||||||| || |||| ||||| ||| | | | Sbjct 2036 AAATACTTGGGAATAACGAATCCTTTGAACCTTATACTAGTAACATTTATTATAGAAGAG 2095 Query 79344 CATTAGCTGGTGAATTTGTTGTGGTTAACAAACATCTTGTT-GAAGATTTGAAGAAGTTA 79402 || ||| |||||| |||| |||||| ||| ||||| ||||| | | | || Sbjct 2096 TTTTGAGTGGAGAATTTTTTGTCGTTAACCCTCAT-TTGTTAAAAGATCT--ATTCGATA 2152 Query 79403 -GGTCTT-TGGTCAAAAGAGATGAAA---GACTTAATGGTCAAAGCCGGAGGGAGTGTGC 79457 || ||| ||| |||| |||||| | ||||| | | ||| ||||| | Sbjct 2153 GGGGCTTATGGGACGAAGATATGAAACAGCAGTTAATTGCGCATAATGGA---AGTGTCC 2209 Query 79458 AAAACATAGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTA 79517 | | ||| || ||||| || || | || | || || || || || |||||||| | Sbjct 2210 AGTATATAAGTGAAATACCCAATGATTTGAAGGAACTCTACAAAACAGTCTGGGAAATCA 2269 Query 79518 GCCAAAAATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATC 79564 ||||| |||||||||||||| || || |||| ||||||| Sbjct 2270 AACAAAAGAACATTATCGACATGGCTGCCGATCGGGGAGTTTTTATC 2316 >seq428 Length=3574 Score = 185 bits (204), Expect = 1e-41 Identities = 443/670 (66%), Gaps = 9/670 (1%) Strand=Plus/Minus Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 |||||||||||||| ||| || ||||| | | | ||||| ||| || ||||| | Sbjct 1499 TTTGAAGAGTTAAATGATGACTTATTTAGAGAAACTTTAGAACCAGTTAAAAAAGTATTA 1440 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||| ||||| || || ||| |||| ||||| ||| | || || || ||||| Sbjct 1439 GATGATGCAAAATATGAAAAAAGTAAAATTGACGAAATAGTCTTAGTAGGTGGTTCAACA 1380 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || || |||||||| || || || || ||| |||||| ||| | | Sbjct 1379 CGTATACCTAAAATTCAACAAATAATTAAAGATTTTTTTAATGGTAAAGAACCAAATAGA 1320 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 || || || |||||||| || ||||||||||| || | || || | |||| | | | Sbjct 1319 GGAATTAATCCAGATGAAGCTGTAGCTTATGGTGCTGCTATCCAAGCAGGTATTATTTTA 1260 Query 196430 GGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTG 196489 || | || ||| || ||||| | | || | ||||| | || | | | Sbjct 1259 GGAG-----AAGAATTAC----AAGATGTAGTTTTATTAGATGTAACTCCATTGACTTTA 1209 Query 196490 GGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCG 196549 ||| ||||||| | ||||| |||||||| || ||||| | || || ||| ||| || Sbjct 1208 GGTATTGAAACTGTTGGTGGGATTATGACTCAACTTATTAAAAGAAATACAGTTATACCA 1149 Query 196550 ACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 || || || |||| ||||| || ||| ||||| ||||||| ||| |||||| Sbjct 1148 ACAAAAAAATCACAAACATTTTCTACTTATCAAGATAACCAACCAGCTGTCTTAATTCAA 1089 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 || | |||||||||||| | |||| ||||| ||| || | |||| || || || Sbjct 1088 GTTTTTGAAGGAGAACGAGCATTAACAAAAGATAATCATTTATTAGGAAAATTTGAATTA 1029 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 | || |||||| |||||| |||||||| ||| | ||| | || || | | || Sbjct 1028 TCTGGTATTCCACCTGCACAAAGAGGTGTACCAAAAATTGAAGTCACATTTACTGTTGAT 969 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 ||||| || || | || ||| || ||||| | |||| || ||| || ||| Sbjct 968 AAGAATGGTATATTACATGTTGAAGCAGAAGACAAAGGAACTGGTAAGTCTAAAGGAATT 909 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGAT 196849 ||||||||||| || || | | || ||||| | || ||| ||| || | || Sbjct 908 ACTATTACCAATGATAAAGGTAGATTATCAAAGGAACAGATAGAAAAGATGATTAACGAC 849 Query 196850 GCGGAAAAGT 196859 || ||||||| Sbjct 848 GCTGAAAAGT 839 Score = 176 bits (194), Expect = 6e-39 Identities = 257/364 (71%), Gaps = 6/364 (2%) Strand=Plus/Minus Query 195625 ATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATC 195684 |||||| || ||| ||||| ||||||| || |||||||| || | || |||| Sbjct 2058 ATTTGCACCTGAACAAATTAGTGCTATGGTATTAGAAAAGATGAAAGAAATAGCTCAATC 1999 Query 195685 TTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTC 195744 || | || ||| | || ||| ||||||| || || ||||| || || || | |||| | Sbjct 1998 CTTTTTAGGAAAACCAGTTAAAAATGCAGTAGTTACAGTACCAGCATATTTTAATGATGC 1939 Query 195745 ACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTAT 195804 ||| |||| || ||||| ||||| | | ||||| ||| |||| | | | ||||| Sbjct 1938 TCAAAGACAAGCTACAAAAGACGCAGGAACAATTGCTGGTTTAAATATTGTACGTATTAT 1879 Query 195805 CAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAA 195864 ||||||||||| || ||||| | || |||||| | || |||| | ||||| | Sbjct 1878 TAATGAACCAACTGCTGCTGCTTTAGCATATGGTTTAGATAAGA------AGGAAGAAAC 1825 Query 195865 AAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGA 195924 | | |||| | | || | ||||| || || |||||||| ||| |||| |||||| Sbjct 1824 TAGTATATTAGTATACGACTTAGGTGGAGGAACATTTGATGTATCAATTCTTGTTATTGA 1765 Query 195925 AGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTT 195984 |||| | ||||||||| | || || || ||| |||| ||| ||||||| |||||||| Sbjct 1764 TAATGGTGTTTTCGAAGTATATGCAACAGCAGGTAATACACATTTAGGTGGAGAAGATTT 1705 Query 195985 CGAT 195988 |||| Sbjct 1704 CGAT 1701 >seq1821 Length=1654 Score = 129 bits (142), Expect = 8e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| || || || ||||| | || || || || || || | || || || Sbjct 579 GGAAAAACTATAACTCTTGATGTTGAACCATCGGATACTATTGAGAATGTTAAGGCTAAA 520 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 || ||||| |||||||| |||||||| ||||| || || | || ||||| || ||||| Sbjct 519 ATACAAGACAAGGAAGGAATTCCACCTGATCAACAGAGATTAATATTTGCGGGAAAACAA 460 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | ||||||||| | || | | ||||||||| ||||||| ||||| || |||||| | Sbjct 459 TTAGAAGATGGAAGAACATTGTCGGATTACAACATTCAAAAAGAGTCAACCCTACACTTA 400 Query 172069 GTTCTAAGGCTTCGGGGTGGT 172089 ||| |||| | | |||||| Sbjct 399 GTTTTAAGATTAAGAGGTGGT 379 >seq3920 Length=5462 Score = 114 bits (126), Expect = 2e-20 Identities = 248/372 (67%), Gaps = 12/372 (3%) Strand=Plus/Minus Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTT 196435 ||||| |||||||||||||||| ||||| || | || | | | || | ||| | Sbjct 2416 AACCCAGATGAAGCAGTTGCTTTAGGTGCAGCTATACAAGGAGGTGTTTTAAAAGGAGA- 2358 Query 196436 GACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTT 196495 ||||| ||||| | || || | |||||| || |||| | ||| | Sbjct 2357 ------AATAA-----AAGATTTACTTCTTTTAGATGTTATTCCTTTATCATTAGGTATA 2309 Query 196496 GAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAG 196555 ||||| |||||||| | |||||| | ||| |||| || ||||| || || || ||| Sbjct 2308 GAAACTTTAGGTGGTGTATTTACTAAATTAATTAATAGAAATACAACAATCCCAACAAAG 2249 Query 196556 AAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATAT 196615 || ||| | ||||| || | ||||||| ||| || ||| |||| |||| ||| Sbjct 2248 AAATCGCAAATATTTTCCACAGCTGCCGATAACCAAACACAAGTTAGTATTAAAGTTTAT 2189 Query 196616 GAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGG 196675 |||||||| | || | ||||| | | | || |||| ||||| || Sbjct 2188 CAAGGAGAAAGAGAAATGGCTAGTGATAATAAAATGTTAGGCTCTTTTGATTTAGTTGGT 2129 Query 196676 ATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAAT 196735 |||||| ||||||| |||||||||||||| ||| | ||| |||||| | || || ||| Sbjct 2128 ATTCCACCTGCACCTAGAGGTGTTCCACAAATTGAAGTTACATTCGATGTTGATGCTAAT 2069 Query 196736 GGAATTCTAAAC 196747 | |||| | ||| Sbjct 2068 GCAATTATTAAC 2057 >seq1502 Length=19671 Score = 107 bits (118), Expect = 3e-18 Identities = 514/810 (63%), Gaps = 18/810 (2%) Strand=Plus/Minus Query 60175 TAATCACCAACCCGCTTTTCAAAGAAGTTTGTTTTACCATCCAACGAAATATTTTCCATA 60234 ||||| |||| | ||||| || || |||||||| || | | || || ||||| Sbjct 5890 TAATCGGCAACTCTTTTTTCGAAAAAATTTGTTTTTCCTTGAAGAGATATCAAATCCATC 5831 Query 60235 AAATCAAAGGGGTTCTTTGAATTCCAAATCGTTGGGTGTCCAACTTGTTTTAAAAGACGG 60294 ||| ||| || || ||||||| | | ||| | ||| | || ||| | | Sbjct 5830 CAATTAAAAGGATTTTTTGAATAAAAGACTTTTGAGCATCCTAAACATTCTAACAATCTA 5771 Query 60295 TCAGACACGTATTCAATGTATTCCGACATCTTTTCGGAATTCATTCCTATGAGACTACAT 60354 |||| ||| |||||||||||| ||||| | |||||||||||||| | ||| Sbjct 5770 TCAGCCACAAATTCAATGTATTGTGACATTAATCTTGAATTCATTCCTATCAAGTCACAA 5711 Query 60355 GGGAGTGCATCTAAAATAAAACCCTTTTCAATCTCAACAGCTTCTTTTATAATCGTATGA 60414 || | | || | ||||| ||| | || || |||||||||| ||| | ||| Sbjct 5710 GGTAAAGATTCACATATAAATGATCGTTCTACTTCTACTGCTTCTTTTACAATATTCTGA 5651 Query 60415 ATAATATCCTTTGAAGGTTTTTGTTGAAGCATATTAAATAATTCAACTG-CAAATTCTTG 60473 | ||| || | || ||| | || |||| | || || ||| ||| | ||| ||| Sbjct 5650 ACAATTTCTTCTGGTAATTTATTTTCCAGCAGACTATAT-ATTAAACAGTTAAAGTCTGT 5592 Query 60474 ATGAAGACCTTCGTCACGACTAATAAGTTCATTACTGAAACAAAGTCCGGGAAGTAGACC 60533 ||| | ||||| || | |||||| | ||||||||| ||| || || | | | | Sbjct 5591 ATGTAATCCTTCATCTCTACTAATTAATTCATTACTAAAAGTTAGCCCATGTAATTTATT 5532 Query 60534 CCGCTTCTTTAACCAATATACAGCACAGAACGAACCACTGAAAAAGATACCCTCTACACA 60593 | || || ||||| | | |||||| || |||||| || || ||||| |||||||| Sbjct 5531 TTGTTTTTTAAACCAGAAAATAGCACAAAAACTACCACTAAACAATATACCTTCTACACA 5472 Query 60594 CGCAAACGCAAAAAGACGTTCAGCAAATGGTCTAGATTTGTCAAACCATTTCATGGCCCA 60653 ||| || | | ||||| ||||| | | | || | || |||||| ||||| Sbjct 5471 TGCATTTGCTACTATCCGTTCTGCAAAAGAATTGGTATTATTAATCCATTTGGCAGCCCA 5412 Query 60654 TTCAGCCTTTCGTTCGATACAAGGGATTGTTTGAATAGCTTGAAA------TAATTGTTT 60707 ||| || || | | || || ||| || || ||||| |||| | | Sbjct 5411 CAAAGCTTTATTTTTAACAGCTGGTATATTTTCTATTGCGTGAAATAAATTTAATCGCTC 5352 Query 60708 CTTTTCCGAAGGGTCTTTGATATATTTGTCGATTAATTTACTATATGTTTCACCGTGAAC 60767 |||||| || || ||||| || || || || ||| || ||||| |||| Sbjct 5351 CTTTTC------ATCCTTTATATAATTATCAATCAACAAACTGTAAGTTTCTGAATGAAT 5298 Query 60768 CAT-TTCGTTGTGACACTGATAACCATAAAAAGAACGAGCTTCGGAGGCTTGTACTTCAT 60826 | | | || | ||| || |||||| |||||| | ||| ||||| | Sbjct 5297 ATTCTCCACTGCTA-TTTGAAAAGAATAAAATTTCTTAGCTTCCGTTATTTGAACTTC-T 5240 Query 60827 CTGCAAAA-TTATTGTTAATGTTTTCAAAAACAATTCCATCCGACCCAGCGAAGAATGCG 60885 || |||| ||| | | ||||| ||||| |||||||| | || || ||||| Sbjct 5239 CTTAAAAATTTACTAGCCAAATTTTCTAAAACTATTCCATCACTTGCTGCAAAAAATGCT 5180 Query 60886 AGTATGTATTTTATGAACTTCTGTTCGTTATCCGTTAATTGTACCCAATCTTCCATATCT 60945 | | | |||||| || | | ||| || || |||||| | | |||||| || ||| Sbjct 5179 AACACATGTTTTATAAAATGTTTTTCATTTTCATTTAATTTTTCAAAATCTTTCAAATCG 5120 Query 60946 TTTGATAAATCAATTTCTTCTGCCGTCCAA 60975 |||||||||| || |||||||| |||||| Sbjct 5119 CTTGATAAATCTATCTCTTCTGCTGTCCAA 5090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657802616754400