Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1821 159 6e-34 >seq1821 Length=1654 Score = 159 bits (176), Expect = 6e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| | ||||||||| |||| | || | || | || | |||||| ||| || Sbjct 370 AATTTAAAAACCACCTCTTAATCTTAAAACTAAGTGTAGGGTTGACTCTTTTTGAATGTT 429 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || || ||||| ||| |||||||||||||| ||||| |||||||||||||| Sbjct 430 GTAATCCGACAATGTTCTTCCATCTTCTAATTGTTTTCCCGCAAATATTAATCTCTGTTG 489 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || ||||||||||| | || | ||| ||||||||| || Sbjct 490 ATCAGGTGGAATTCCTTCCTTGTCTTGTATTTTAGCCTTAACATTCTCAATAGTATCCGA 549 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 | ||||| || |||||||||||||| ||| Sbjct 550 TGGTTCAACATCAAGAGTTATAGTTTTTCCT 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899572643906400