Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq170 95.1 2e-14 >seq170 Length=9591 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/180 (73%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 194575 AAAAT-TGAAAAT--AAAATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATG 194631 ||||| | ||||| ||||||||||| || || |||||||| || | | ||||| ||| Sbjct 5370 AAAATGTTAAAATCAAAAATTTTTATTGGTCCGACTTATTATCAAAGGTTAAAACATATG 5311 Query 194632 GTTAAGGATAAAATGCATGCTAGAAGTCATGGGCAAGTAACTA-CTTTACATCGACAACC 194690 ||| | |||||||| |||||||||||| || | |||||| ||||| || ||||| Sbjct 5310 GTTGAAGATAAAATACATGCTAGAAGTAGAGGACCTTTAACTATGATTACA-CGTCAACC 5252 Query 194691 AAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTAT 194750 || || | || || ||| ||| || | ||||| |||||||||| ||| ||||| Sbjct 5251 AACAGAAGGAAGATCAAGAGATGGTGGTCTACGTTTTGGTGAAATGGAAAGAGATTGTAT 5192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632432122507600