Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1821 120 2e-22 >seq1821 Length=1654 Score = 120 bits (132), Expect = 2e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATC 29636 || || || || || || |||||||||||||| ||||||| |||| || | ||| || Sbjct 398 ACTAAGTGTAGGGTTGACTCTTTTTGAATGTTGTAATCCGACAAT-GTTCTTCCATCTTC 456 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | |||||| || ||| |||| ||||| || ||||| || ||||| || || |||||||| Sbjct 457 TAATTGTTTTCCCGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTG 516 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 || ||| || ||| | || | ||| || || |||| || ||||||||||||||||| Sbjct 517 TATTTTAGCCTTAACATTCTCAATAGTATCCGATGGTTCAACATCAAGAGTTATAGTTTT 576 Query 29757 GCC 29759 || Sbjct 577 TCC 579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385185068375070