Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq291 102 2e-16 >seq291 Length=4955 Score = 102 bits (112), Expect = 2e-16 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 279288 GTGCATGGAACGTTGGTGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGC 279347 |||||||||| ||| || |||||| | ||| | |||| |||||||||| ||| ||| Sbjct 4090 GTGCATGGAATGTTAAAGATCTTGATCAAATGGCACTACCTCCTTGTCATAT-TTTATGC 4148 Query 279348 -AATTTTGTGTAGTGCAAGGAAAACTAAGCTGTATTCTGCATCAACGCTCCGCTGATCTA 279406 |||||| ||| | | |||||| || |||||| || ||||| | || |||| || Sbjct 4149 CAATTTTATGTTTTTGATGGAAAATTATCATGTATTATGTATCAAAGGTCATGTGATTTA 4208 Query 279407 TTTTTAGGAGTTCCATTTAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACAA 279466 ||||||||| || |||||||| || ||| || | |||||||||||||||||| Sbjct 4209 GGTTTAGGAGTCCCTTTTAATATTGCCTCCTATTCAATATTCACTCATATGATTGCACAA 4268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115067325287630