Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1821 87.8 2e-12 >seq1821 Length=1654 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACG-ATACTATCGAGCAAGTAAAACAAAA 25260 |||||| | || || | || || ||| ||| || ||||||| ||| | || || || Sbjct 579 GGAAAAACTATAACTCTTGATGTTGAA-CCATCGGATACTATTGAGAATGTTAAGGCTAA 521 Query 25261 AATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACA 25320 ||| || || || || || || || ||||| || ||| | || | | || ||||| Sbjct 520 AATACAAGACAAGGAAGGAATTCCACCTGATCAACAGAGATTAATATTTGCGGGAAAACA 461 Query 25321 ACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCAT 25378 | | ||||||| |||| |||| | ||||||| ||||||||||| || ||| | || Sbjct 460 ATTAGAAGATGGAAGAACATTGTCGG--ATTACAACATTCAAAAAGAGTCAACCCTACAC 403 Query 25379 TTAGTGTTAAGATTGAGAGGAGG 25401 ||||| |||||||| ||||| || Sbjct 402 TTAGTTTTAAGATTAAGAGGTGG 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445053952046400