Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq291 86.0 1e-11 >seq291 Length=4955 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 6198 TTGTGCAATCATATGAGTTAGTAGTGAATAACTACTGATATTAAATGGAACTCCCAAAAA 6257 |||||||||||||||||| | || |||||| |||||||| || ||||| ||| Sbjct 4268 TTGTGCAATCATATGAGTGAATATTGAATAGGAGGCAATATTAAAAGGGACTCCTAAACC 4209 Query 6258 TAGATCAGCGGATCTTTGATGTAGAATGCAGCTTAGTTTCCCTTGTACTACACAAAATTG 6317 || |||| || ||||||| | ||| || || ||| || | | ||| ||||||| Sbjct 4208 TAAATCACATGACCTTTGATACATAATACATGATAATTTTCCATCAAAAACATAAAATTG 4149 Query 6318 TACAAAGCTATGACAAGGTGGCAACGTCATATCATCAAGCTCACCAACGTTCCATGCACT 6377 || |||||||||| || | | ||| | |||||| || ||| |||||||||| Sbjct 4148 GCATAAAATATGACAAGGAGGTAGTGCCATTTGATCAAGATCTTTAACATTCCATGCACA 4089 Query 6378 TAGAATA 6384 | |||| Sbjct 4088 CAAAATA 4082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113726650178960