Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq1294 123 3e-23 >seq1294 Length=13095 Score = 123 bits (136), Expect = 3e-23 Identities = 314/464 (68%), Gaps = 29/464 (6%) Strand=Plus/Minus Query 136381 CAGGAAAGGGAATACTTGCTGTTGATGAATCTACAAATACTTGTGGGAAAAGATTGGCTA 136440 ||||||||||||| | || | |||||||||||| | || | ||| |||| | || Sbjct 11040 CAGGAAAGGGAATTTTAGCAGCTGATGAATCTACCCAAACAATTAAGAAGCGATTTGATA 10981 Query 136441 GTATTGGAGTAGAAAATACAGAGGCAAATAGA-CAGGCATACAGAGGTATGTTATT---T 136496 || | ||||||| || | | ||||||| | || || |||| | ||||| | Sbjct 10980 ACATACAAATAGAAAACACTGTTGAAAATAGAGCTAGC-TATAGAGACTTATTATTCGGT 10922 Query 136497 ACCACAGAGGGATTAGGTAA--TTATATTAGTGGTGCTATCTTATTTGAAGAAACACTAT 136554 ||| ||||||||||||| |||||| || |||| || || ||||||||||| ||| Sbjct 10921 GCCA---AGGGATTAGGTAAATTTATATCAG--GTGCGATTTTGTTTGAAGAAACCTTAT 10867 Query 136555 TTCAAGATCATGCTGATGGAGAAAGCATGATTGCAAA---GTTAGAGAAGCAAGGAATTA 136611 ||||| | ||| | |||| ||| | | ||| ||| | || ||||||| | Sbjct 10866 TTCAAAAAAATGAAGCGGGAG-TTCCAT--TAGTAAATTTATTACATAATGAAGGAATAA 10810 Query 136612 TACCAGGTATCAAGGTAGATAAAGGATTA-AAACCATTAGTTGGTGCATTAGAGCATGAG 136670 ||||||| || || || |||||||| ||| | ||||| | || | ||| |||| Sbjct 10809 TACCAGGAATAAAAGTTGATAAAGGTTTAGTATCCATTCCAT-GTAC---AGATGATGAA 10754 Query 136671 ACATATTGTTCTGGATTAGATGGTCTAACAGAAAGAGCAAGTGACTATTATGGTAGAGGT 136730 | || ||||||||||| || |||| ||| | || |||||| | || Sbjct 10753 AAATCAACACAAGGATTAGATGGGTTAGCAGATAGATGTAAAGAATATTATAAAGGTGGA 10694 Query 136731 GCAAGATTTGCTAAGTGGAGAGCAGTTCTACAAATT---ACAGAAGATGGA---CCTTCT 136784 ||||| |||||||| |||||||| ||| || |||| || | | | ||| ||| || Sbjct 10693 GCAAGGTTTGCTAAATGGAGAGCTGTTTTAGTAATTGACACTGCAAAAGGAAAGCCTACT 10634 Query 136785 GATCTTGCCATTAGAGAAAATGCATGGGGTCTTGCTAGATATGC 136828 ||| | | |||| |||| |||||||| | ||||||||||| Sbjct 10633 GATTTATCTATTAAGGAAACGGCATGGGGGTTAGCTAGATATGC 10590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631369819053200