Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1821 96.9 8e-15 >seq1821 Length=1654 Score = 96.9 bits (106), Expect = 8e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || || ||||||||||| ||||||||||| | || ||||| |||||||||| | Sbjct 404 TGTAGGGTTGACTCTTTTTGAATGTTGTAATCCGACAATGTTCTTCCATCTTCTAATTGT 463 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || | ||||| || || | | ||||||||||| ||||| ||||| Sbjct 464 TTTCCCGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGTATTTTA 523 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077 || ||| |||| | | || || || || |||||||| |||||||| || Sbjct 524 GCCTTAACATTCTCAATAGTATCCGATGGTTCAACATCAAGAGTTATAGTTTTTCC 579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153713325198170