Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1821 102 2e-16 >seq1821 Length=1654 Score = 102 bits (112), Expect = 2e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 177947 AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAA 178006 ||||||||| || || || || || ||| || || || || ||||| || || || Sbjct 580 AGGAAAAACTATAACTCTTGATGTTGAACCATCGGATACTATTGAGAATGTTAAGGCTAA 521 Query 178007 GATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACA 178066 || || ||||| |||||||| || || || || || || | || || || |||||||| Sbjct 520 AATACAAGACAAGGAAGGAATTCCACCTGATCAACAGAGATTAATATTTGCGGGAAAACA 461 Query 178067 GCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCT 178126 | ||||||||||| || | | ||||| ||| | |||||||| ||||| || || | Sbjct 460 ATTAGAAGATGGAAGAACATTGTCGGATTACAACATTCAAAAAGAGTCAACCCTACACTT 401 Query 178127 TGTTTTGAGACTCAGA 178142 ||||| ||| | ||| Sbjct 400 AGTTTTAAGATTAAGA 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203619076200380