Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2752 215 6e-51 >seq2752 Length=4442 Score = 215 bits (238), Expect = 6e-51 Identities = 496/741 (67%), Gaps = 11/741 (1%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 ||||| ||||||||||| |||| |||| ||| ||||||| | | | |||| ||| Sbjct 4005 TAGACAGCCATCTCCATCTGGATTCGTCCGTGCGGGACGTAGCCCACGACCTCAAAATCC 3946 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCG--CCTC----AGGATCCTGAGCCTGGGA 145650 || || |||| || || || |||| | || ||| ||||| | | |||| Sbjct 3945 TCGGCGGTGAAATCGTCGATTTCCTTGATGCGTTCCTTGTTGAGGATGTTCACAATGGGG 3886 Query 145651 AAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710 || || | || || |||||| || | | ||| || ||||| |||||| Sbjct 3885 AACGGTCTCGGTTCTCTCCGCAGCTGCTCTTTTAAAGCCTCGACATGGTTCGTGTAGACA 3826 Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770 |||| || ||||| || ||| ||||| ||| || | ||| || ||| || ||| Sbjct 3825 TGCGTGTTCCCCATGAAGTGAATGAACTCCTTAGGTTTTAGGTTGCAGACGTGTGCAACC 3766 Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830 ||| |||| || || ||| || ||||||||||| || || || || | || | | Sbjct 3765 ATGAGCGTCAAAAGCGAATAGGAAGCGATGTTGAAGGGGACGCCGAGGCCGACATCGCAC 3706 Query 145831 GAGCGCTGGTACAGCTGGCAGGAGAGCTCC--CCGCCCGC-CACGTAGAACTGGCACAGG 145887 || ||||| |||| ||| || |||||| | | || ||||||||||||||||| Sbjct 3705 GACCGCTGATACATGATGCACGACAGCTCCTTCTGGTCGTTCACGTAGAACTGGCACAAC 3646 Query 145888 AGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACG 145947 | ||| || |||||||| ||||| || ||| | || || |||||||| || | || Sbjct 3645 AAGTGACAAGGCGGCAGCGCCATTTCGTCCAGCGCTGCAGGATTCCAGGCAGTCATGAGC 3586 Query 145948 AGCCTCCTGCTCTCGGGG-TTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCAC 146006 | | | | ||| || ||| | | | | | |||| | | | |||||||| || Sbjct 3585 ATGCGAC-GATCTGTTGGATTCGTTCTCAGCATCTGGATCACATTCTTCAGCTGGTCGAC 3527 Query 146007 GCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTG 146066 ||||||||| ||| ||||| | ||| ||| || || |||||||| |||||||| Sbjct 3526 GCCCTGCCCTGTGTAGTCTGTGTGCATGTCTTTGTATGCCGCGCCGAAGTGTCTCCACTG 3467 Query 146067 GAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAG 146126 ||| |||||| | || || | ||| ||| ||| | ||| || | | |||| Sbjct 3466 GAAGCCGTAGCCCGGGCCGATGTCTCCGACCTCTCGGTGGGGGAGATTGCGCGAATCGAG 3407 Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGA 146186 ||| || || | | | || |||||||||||| |||||| || | || || | || | Sbjct 3406 GAACTCGCGTGTCACATTCTTGTCCCAGATCTTCACGCCCTTCTCAGAAAGATGGTTTGC 3347 Query 146187 GTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCT 146246 || |||| || | |||||||| |||| ||||||||||||||| ||||||| || | Sbjct 3346 GTTCGTGTCGCCGCGAATGAACCACAGCAACTCTTCGAGGACCCCTTTCCAGAACACACG 3287 Query 146247 CTTGGTGGTCAGCAGGGGGAA 146267 ||| ||||| || || || || Sbjct 3286 CTTTGTGGTGAGAAGTGGAAA 3266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590047111761000