Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq794 87.8 2e-12 >seq794 Length=10084 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/124 (77%), Gaps = 9/124 (7%) Strand=Plus/Plus Query 60057 AAAAATTTT---CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||||||||| |||| | | |||||| |||||| ||||| |||||||||||||||| | Sbjct 3911 AAAAATTTTAAACTCCGAGACCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAA 3970 Query 60114 TACTCACCACTATACTACCGAGGATTGAAT--ATATAACT----TGAATATTACAATCCT 60167 |||| ||||||||||| | ||||| ||| ||| ||| | ||| ||| |||| | Sbjct 3971 TACTTGCCACTATACTATCTCGGATTCAATTATTATTACTTCCGTAAATGTTATAATCGT 4030 Query 60168 ATTT 60171 |||| Sbjct 4031 ATTT 4034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571788830427000