Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq466 131 3e-25 >seq466 Length=3970 Score = 131 bits (144), Expect = 3e-25 Identities = 136/176 (77%), Gaps = 17/176 (10%) Strand=Plus/Minus Query 176672 GCTCTGCTTATATAGACCGCCCATAGGGCACGCCTACCGCCCATTGACGTGTAATGTGCG 176731 |||||||||||||||||| |||| | ||||||||||||||||| |||| Sbjct 1301 GCTCTGCTTATATAGACCTCCCACCGTACACGCCTACCGCCCATT-----------TGCG 1253 Query 176732 TCAATGGGGCGGGGTT--TATGACTCATATTGGAAATTCCCATTCATTTTGGTGCCAGAA 176789 |||||||||||| ||| || ||| || ||||||| |||| || |||||||||||| || Sbjct 1252 TCAATGGGGCGGAGTTGTTACGAC--ATTTTGGAAAGTCCCGTTGATTTTGGTGCCAAAA 1195 Query 176790 CGGATGCCCATTGACGTCAATGGGGCGG-GATTATGGAAAGTCCCATTAGTCATAC 176844 | | ||||||||||||||||||| || || | |||||| ||| | ||||| || Sbjct 1194 CAAACTCCCATTGACGTCAATGGGGTGGAGACT-TGGAAATCCCCGTGAGTCAAAC 1140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771311591433000